Escherichia coli clone D i2: i02_0955
Help
Entry
i02_0955 CDS
T02004
Symbol
ycaO
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
eld
Escherichia coli clone D i2
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eld03009
]
i02_0955 (ycaO)
Ribosome biogenesis [BR:
eld03009
]
Prokaryotic type
ribosomal protein modification factors
i02_0955 (ycaO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AER83540
LinkDB
All DBs
Position
complement(972464..974257)
Genome browser
AA seq
597 aa
AA seq
DB search
MCAFRTTKVIFMTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIR
DKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWF
PLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTIYI
PMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPA
VVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVT
ELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWSFS
GTTEEEFATLMAIFKKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSH
LRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKA
MLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFV
RMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
ttgtgcgctttccgtacgactaaagtgattttcatgacgcaaacatttatccccggcaaa
gatgccgctctggaagattccatcgcacgcttccagcaaaaactttcagacctcggtttt
cagattgaagaggcctcctggctgaatccggtgcctaacgtctggtctgtacatattcgc
gacaaagagtgcgcactgtgttttaccaacggtaaaggcgcaaccaaaaaagcggcgctg
gcttctgccctcggtgaatatttcgagcgtctctcaaccaactacttttttgcggacttc
tggctgggcgaaaccatcgccaacggcccattcgtgcattatcccaacgaaaaatggttc
ccactgaccgaaaatgacgatgtaccagaagggctgctcgatgaccgtctgcgcgcattt
tacgatccggagaatgaactgaccggtagtatgctgattgacctgcaatccggtaacgaa
gatcgtggtatttgcggtctaccgtttacgcgccagtccgacaatcagaccatttatatt
ccgatgaatatcattggtaacttgtacgtttctaacggtatgtctgctggcaatacccgt
aacgaagcacgcgttcaggggttgtccgaagttttcgaacgttacgtgaaaaaccgcatt
attgctgaaagcatcagcttgccggaaatcccggcagacgtgctggcacgttatccagca
gtagttgaagcgatcgaaacgctggaagcggaaggtttcccgatcttcgcttatgacggt
tcgcttggcggccagtatccggtgatttgcgtggtactgttcaatcctgctaacggtacc
tgctttgcctcattcggtgcgcatcctgattttggcgttgcactggaacgtaccgtgacc
gagctgctgcaaggtcgtggcctgaaagatctggatgtgtttactccaccaaccttcgat
gatgaagaagtcgctgaacataccaacctcgaaacgcactttatcgattccagcggttta
atctcctgggacctgttcaagcaggatgccgattatccgtttgttgactggagcttctcc
ggcaccacggaagaagagttcgccacgctgatggctatcttcaaaaaggaagataaagaa
gtttatattgccgattacgagcatctgggtgtctacgcttgccgtattatcgtgcctggc
atgtccgatatttatccggctgaagatctgtggctggcgaataacagtatgggcagccat
ttacgtgaaacgattctttcgctaccaggtagcgagtgggaaaaggaagattacctgaac
ctcatcgagcaactggatgaagaaggttttgatgactttacccgcgtgcgtgaactgttg
ggtctggcgaccgggtcggataacggctggtacactctgcgtatcggtgaattaaaagcc
atgctggcgctggctggtggcgatctggaacaggctctggtctggaccgaatggacgatg
gagtttaactcatcagtattcagcccggaacgcgccaattattatcgctgcctgcaaacg
ttgttattactggcgcaggaagaagatcgccagccgctgcaatatctgaatgcgtttgtt
cgcatgtacggcgcagatgccgtggaagccgccagtgcggcaatgagcggcgaagcggcg
ttttatggcttgcaaccagtagatagcgatctgcacgcgtttgctgcacatcagtcgttg
ttgaaggcctacgaaaagctgcaacgcgccaaagcagcattctgggcaaaataa
DBGET
integrated database retrieval system
