Escherichia coli clone D i2: i02_1279
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Entry
i02_1279 CDS
T02004
Symbol
potD
Name
(GenBank) spermidine/putrescine ABC transporter
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
eld
Escherichia coli clone D i2
Pathway
eld02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
i02_1279 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eld02000
]
i02_1279 (potD)
Transporters [BR:
eld02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
i02_1279 (potD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
AER83860
LinkDB
All DBs
Position
complement(1287478..1288524)
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AA seq
348 aa
AA seq
DB search
MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYE
SNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKSKLSNFSNLDPDMLNKPFD
PNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKL
GYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGSAFVARQAG
TPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIGYPTPNLAA
RKLLSPEVANDKTLYPDAETIKNGEWQNDVGSASSIYEEYYQKLKAGR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatggtcacgccacctgctcgcggcgggtgctctggcactgggcatgagcgcc
gctcacgccgatgacaacaacacgctgtatttctacaactggaccgagtacgtgccgcca
ggactgcttgaacagttcaccaaagaaaccggtattaaggttatctattcgacttacgag
tcgaacgaaaccatgtacgcgaagctgaaaacgtacaaagacggtgcctatgacctggtg
gttccttcaacctattacgtcgataaaatgcgtaaagaagggatgatccagaagatcgac
aagtcgaagttaagcaatttcagcaacctcgatccagacatgctcaacaagccgtttgac
ccgaataacgactattccattccgtatatctggggtgcaacggcgattggcgttaacggt
gatgcggtggatccgaaatctgtcaccagctgggccgatctgtggaagcctgagtacaaa
ggcagcctgctgctgaccgacgatgcccgtgaagtgttccagatggcgctgcgtaagctg
ggctactccggtaacaccaccgatccgaaagagattgaagctgcatacaacgagctgaaa
aaactgatgccaaacgtcgcggcgtttaactccgataaccccgctaacccgtatatggaa
ggcgaagttaacctcggcatgatctggaacggttctgctttcgttgcacgccaggcgggt
acgccaattgatgtggtatggccgaaagaaggcggcattttctggatggacagcctggcg
atcccggcaaatgccaaaaacaaagaaggcgcgctgaaattgatcaacttcctgctgcgc
ccggatgtggcaaaacaggttgctgaaactatcggttatccaacgccaaaccttgcggcg
cgtaagctgttaagtccggaagtggcgaacgataaaacgctctacccggatgctgaaacc
attaaaaatggtgaatggcaaaatgacgtaggctccgccagcagcatttatgaagagtat
tatcagaagctgaaagcaggacgttaa
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