Escherichia coli clone D i2: i02_2040
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Entry
i02_2040 CDS
T02004
Symbol
yoaD
Name
(GenBank) hypothetical protein
KO
K21090
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
eld
Escherichia coli clone D i2
Pathway
eld02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
i02_2040 (yoaD)
Enzymes [BR:
eld01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
i02_2040 (yoaD)
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Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
ECR1_N
MSC
Motif
Other DBs
NCBI-ProteinID:
AER84609
LinkDB
All DBs
Position
1992516..1994144
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AA seq
542 aa
AA seq
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MSPYAYRVARMQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFA
NHAVEELDKVLLPLQAGSEVLLPLIGLPCSVTHLPLRKQAAKLQTVRSIGLVQDGTLYCS
SIFGYRNVPVVDILAELPAPQPLLRLTTDRALIKGSPVLIQWTPAAGSSNAGVMEMINID
LLTAMLLEPQLPQISSASLTVDSRHLLYGNGLVDSLPQPENNENYQVSSQRFPFTINVNG
PGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLL
NARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMS
SQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRK
NVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALAQRLNIE
LVAEGVETQEQAKYLRSHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMP
LR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgccatacgcttacagggtggcccgcatgcaaaaagcacaacggatcattaaaacc
tatcgccgtaatcgaatgattgtttgtacgatttgcgcactcgttacgctcgcttcgacc
ctgagcgtgcgatttatttcacagcgtaacttaaatcaacaacgggtagtacaattcgcc
aatcacgctgtagaggaattagataaagtactgcttcccctacaggcaggtagcgaagtc
ttgcttccgctgattggtctgccctgctctgtcacccatttgccattacgtaaacaggct
gcaaaactccaaactgtgcgatccattggcctggtgcaagacggcacactttattgctcc
agcatttttggttatcgcaatgtgcccgtcgtggacattctggctgaacttcctgcaccg
caaccacttttacgactgacgaccgaccgtgccctgataaaaggcagtccggttttgatt
caatggacgcctgcagcgggcagtagcaatgctggggtcatggagatgattaacatcgac
ttactgacggcaatgctccttgaaccacaactgccgcaaatcagtagcgccagcctgacg
gtggacagtcggcatttgctctatggtaatgggctggtagattcccttccgcaacctgaa
aataatgaaaactatcaggtttcttcgcaacgctttccttttaccattaacgttaatggc
ccgggggctacggcgctggcatggcactatcttccaacacaattaccgctggcggtactg
ctaagtttactggtgggctacatcgcctggctggcgaccgcttaccgaatgagcttttcc
cgcgagatcaatctgggcctggcgcaacatgagttcgaattgttctgtcagcctttgctt
aatgcgcgcagccagcaatgtattggtgtagagattttgctgcgctggaacaatccgcgt
cagggctggatttcaccggatgtgtttattcctatcgcggaagaacatcatttaattgtg
ccactaacccgctatgtgatggcagaaaccattcgtcagcgccatgttttcccaatgagt
agtcagtttcatgttggcattaacgtcgcacccagtcattttcgccgtggtgtgctgata
aaagatctcaatcagtactggtttagcgctcacccgattcagcaactgatcctcgaaatc
accgaacgcgatgccttactggatgttgattatcggattgcccgcgagctgcatcgtaaa
aacgtcaaactggcgattgatgacttcggcaccggcaacagttcgttttcctggcttgaa
acattacgtcctgacgtgctgaaaattgataagtcatttaccgcagctataggttctgac
gcggttaactcgacggtgaccgatatcatcatcgcactggcgcaaagactgaatattgaa
ctggtggcggagggcgtagaaacgcaagaacaggcgaagtatttgcgcagtcatggcgtg
catattttgcaagggtatttgtacgcacagccgatgccgctacgtgattttcccaaatgg
ctggcgggcagccaaccgccgcccgcccggcataatggacatatcacccccattatgccg
ttacgttaa
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