Escherichia coli clone D i2: i02_2183
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Entry
i02_2183 CDS
T02004
Symbol
rcsA
Name
(GenBank) colanic acid capsular biosynthesis activation protein
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
eld
Escherichia coli clone D i2
Pathway
eld02020
Two-component system
eld02024
Quorum sensing
eld02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
i02_2183 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
i02_2183 (rcsA)
02026 Biofilm formation - Escherichia coli
i02_2183 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eld03000
]
i02_2183 (rcsA)
Transcription factors [BR:
eld03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
i02_2183 (rcsA)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RcsA_N
GerE
Motif
Other DBs
NCBI-ProteinID:
AER84749
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Position
2117473..2118096
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AA seq
207 aa
AA seq
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MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH
DASNSQRIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI
LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI
KTHNKQVIYHVVRLTDNVTNGIFVNMR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgattattatggatttatgtagttacacccgactaggtttaaccgggtatctg
ttgagtagaggggttaaaaaaagagaaatcaacgacattgaaaccgttgatgaccttgcc
atagcttgtgattcacagcgcccttcagtggtgtttattaatgaggactgtttcatccac
gatgcttctaacagtcagcgcatcaagcacatcattaatcaacatcccaatacgttattt
atcgtttttatggcaattgccaatgttcattttgatgaatatctattggtcagaaaaaat
ttattgatcagttctaaatcgattaaaccggaatctctcgacgatatccttggcgatatt
ctgaaaaaagagacaacgataacctcgtttttaaatatgccgacgttatcattgagccga
accgaatcgagtatgttgcgaatgtggatggcaggtcagggaaccattcaaatctccgac
caaatgaatatcaaagccaagaccgtttcatcgcataaaggtaatattaaacgtaagatc
aaaacgcataataaacaggttatctaccatgtcgtccgactgacggataatgtgactaat
ggtatttttgtcaacatgcgctaa
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