Escherichia coli clone D i2: i02_2943
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Entry
i02_2943 CDS
T02004
Symbol
ygaE
Name
(GenBank) DNA-binding transcriptional regulator CsiR
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
eld
Escherichia coli clone D i2
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eld03000
]
i02_2943 (ygaE)
Transcription factors [BR:
eld03000
]
Prokaryotic type
Helix-turn-helix
GntR family
i02_2943 (ygaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCD
GntR
HTH_41
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
AER85489
LinkDB
All DBs
Position
2962888..2963568
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AA seq
226 aa
AA seq
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MLRSHTMTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAER
LVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKL
EACDASEKMLDEWDLRHQAFHTAIVAGCGSYYLLQMRERLFDLAARYRFIWLRRTVLSVE
MLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMAGN
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgctcaggagtcacaccatgaccattacctctctggatggctatcgctggctgaagaac
gatattattcgcggcaattttcagccggatgaaaaattacggatgagtttgctgacatcg
cgttatgcacttggcgtcggaccgttgcgggaagcgctttcgcaactggtggcagaacga
ctggtcacggtggtgaatcaaaaagggtatcgggtggcgtctatgtcagagcaggagctg
ctcgatattttcgacgcccgcgccaatatggaagcgatgctggtgagtctggcgattgcc
cgcggtggcgatgaatgggaggcagacgttctcgcaaaagcgcatctgctcagtaagctt
gaggcctgtgacgccagtgagaaaatgcttgatgagtgggatctgcgtcatcaggcgttt
catactgcaattgtggcgggctgtggttcttactatttgctgcaaatgcgtgaacggttg
tttgatctggcagcgcgttatcgatttatctggctgcggcgaacagtgctttcggtggaa
atgctggaagataaacacgatcagcaccagaccctgactgcggcggtactggcgcgagat
accgcgcgcgccagtgagttaatgcgccagcatttactgacgccaattcccattatccag
caggcgatggctggcaattaa
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