KEGG   Escherichia coli clone D i2: i02_3833
Entry
i02_3833          CDS       T02004                                 
Symbol
hofQ
Name
(GenBank) outer membrane porin HofQ
  KO
K02507  protein transport protein HofQ
Organism
eld  Escherichia coli clone D i2
Brite
KEGG Orthology (KO) [BR:eld00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:eld02044]
    i02_3833 (hofQ)
Secretion system [BR:eld02044]
 Type II secretion system
  Type IVa pilus homolog protein
   i02_3833 (hofQ)
SSDB
Motif
Pfam: Secretin Secretin_N STN type_II_gspD_N0 DUF3394 DUF8665
Other DBs
NCBI-ProteinID: AER86364
LinkDB
Position
complement(3816575..3817813)
AA seq 412 aa
MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL
HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSVAWQNDNIARQEAEQARAQANLPLENR
NITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSTLEQWVSQMDLPVGQ
VELSAHIVTINEKSLRELGVKWTLADAQQAGGVGQVTTLGSDLSVATATTHIGFNIGRIN
GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA
VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL
GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgaagcaatggatagccgcactactgttgatgctgatacccggcgtacaggcggcaaag
ccgcaaaaagtgacgctgatggtggatgacgttccggtagctcaggtgttgcaggcgctg
gctgaacaggagaagttgaacctggtggtttcgccagacgtcagcggtacggtgtcgtta
catctaacagatgttccctggaagcaggcactacaaactgtagtgaaaagcgccggactg
ataacgcggcaggaaggcaatattctctcggtgcattccgttgcctggcagaatgacaat
atcgcccgccaggaggcggagcaggcgcgggcgcaggcaaatctgccgctggaaaatcgc
aatattactctgcaatacgccgacgccggagagctggcgaaagcgggggagaagctactg
agtgccaaagggagtatgaccgtcgataaacgcaccaatcgccttttgctgcgagataac
aaaacggcgttaagcacgcttgaacagtgggtatcgcaaatggatctgccggtcgggcag
gttgagctctcggcgcatattgtcaccattaatgaaaaaagtttgcgtgagttaggtgtg
aaatggacgctggccgatgcgcaacaagctggtggcgttgggcaagtcaccacgcttggc
agcgacctctccgtagcgacggcgacaacgcatatcggttttaacattggacgcatcaac
ggacgtttactggatcttgagctttccgcgctcgaacaaaaacagcagctggatattatc
gccagtccgcgtctgctggcctcacatcttcagcctgccagcattaaacaggggagcgaa
attccatatcaggtttccagcggggaaagtggcgcgacgtcggtggaatttaaagaggcc
gtcctggggatggaagtcacgcccacggtgttacaaaaaggtcgcatccggctgaaatta
cacatcagccagaacgttccggggcaggtgctacagcaggcagatggcgaagtgctggcg
attgataagcaggagatcgaaacgcaggtcgaggtcaaaagcggagaaacgttggcgctg
ggcggcatttttacccgtaaaaataaatcgggtcaggatagcgtaccgttgcttggcgac
attccctggttcgggcaattatttcgtcatgacggaaaagaagatgaacgacgcgagtta
gtggtgtttatcacgccacgactggtttccagtgagtaa

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