Escherichia coli clone D i2: i02_4638
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Entry
i02_4638 CDS
T02004
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
eld
Escherichia coli clone D i2
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eld03000
]
i02_4638 (soxR)
Transcription factors [BR:
eld03000
]
Prokaryotic type
Helix-turn-helix
MerR family
i02_4638 (soxR)
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GFIT
Motif
Pfam:
MerR-DNA-bind
MerR
MerR_1
HTH_3
HTH_17
DUF2670
TPP_enzyme_M
NinG
Motif
Other DBs
NCBI-ProteinID:
AER87152
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Position
4651851..4652315
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AA seq
154 aa
AA seq
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MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAII
KIAQRIGIPLATIREAFGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCI
GCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaattaccccgcattaaagcgctgctaacccccggcgaagtggcgaaacgc
agcggtgtggcggtatcggcgctgcatttctatgaaagcaaagggttgattaccagtatc
cgtaatagcggcaatcagcggcgatataaacgtgatgtgttgcgatatgtcgcaattatc
aaaattgctcagcgtattggcattccgctcgcaaccattcgtgaagcgtttggcgtgttg
ccagaagggcatacgttaagtgcgaaagagtggaaacagctttcgtcccaatggcgagaa
gagttggatcggcgcattcataccttagtggcgctgcgtgacgaactggatggatgtatt
ggttgtggctgcctttcgcgcagtgattgcccgttgcgtaacccgggcgaccgattagga
gaagaaggtaccggcgcacgcttactggaagatgaacaaaactaa
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