Escherichia coli clone D i2: i02_4757
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Entry
i02_4757 CDS
T02004
Symbol
yjeR
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
eld
Escherichia coli clone D i2
Pathway
eld03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
i02_4757 (yjeR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eld03019
]
i02_4757 (yjeR)
03009 Ribosome biogenesis [BR:
eld03009
]
i02_4757 (yjeR)
Messenger RNA biogenesis [BR:
eld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
i02_4757 (yjeR)
Ribosome biogenesis [BR:
eld03009
]
Eukaryotic type
Pre-60S particles
RNases
i02_4757 (yjeR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AER87268
LinkDB
All DBs
Position
4769425..4769970
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AA seq
181 aa
AA seq
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MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD
WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaatgaaaacaacctgatttggatcgatcttgagatgaccggtctggatccc
gagcgcgatcgcattattgagattgccacgctggtgaccgatgccaacctgaatattctg
gcagaagggccgaccattgcagtacatcagtccgatgaacagctggcgctgatggatgac
tggaacgtgcgcacccataccgccagcgggctggtagagcgtgtgaaagcgagcacgatg
ggcgatcgtgaagctgaactggcaacgctcgaattcttaaaacagtgggtgcctgcggga
aaatcgccgatttgtggtaacagcatcggtcaggaccgtcgcttcctgtttaaatacatg
ccggagctggaagcctacttccactaccgctatctcgatgttagcaccctgaaagagctg
gcgcgccgctggaagccggaaattcttgacggctttaccaagcaggggacgcatcaggcg
atggatgatatccgtgaatcggtggcggagttggcttactaccgcgagcattttatcaag
ctgtaa
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