Escherichia coli clone D i2: i02_4867
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Entry
i02_4867 CDS
T02004
Symbol
yjgR
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
eld
Escherichia coli clone D i2
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eld03400
]
i02_4867 (yjgR)
DNA repair and recombination proteins [BR:
eld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
i02_4867 (yjgR)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
AAA_10
ResIII
FtsK_SpoIIIE
AAA_16
SLFN-g3_helicase
AAA_30
AAA
AAA_25
T2SSE
AAA_7
AAA_19
CbiA
nSTAND_NTPase5
Hydrolase
SRP54
AAA_18
AAA_28
NTPase_1
nSTAND3
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AER87376
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Position
complement(4877151..4878653)
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AA seq
500 aa
AA seq
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MSKPLLIARTLDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVK
GDLTGVAAEGTASEKLLARLKNIGVNDWQPHTNPVVVWDIFGEKGHPVRATVSDLGPLLL
ARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASV
GAIQRGLLSLEQQGAAHLFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLL
WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFV
SQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRPNPTFDTEKAIQELGTGE
ALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLVNHSPVYGKYEDDVDRESAYEM
LQKGFQASIEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAAR
QVTNQIVRGMLGSLLGGRRR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacccctgttaattgcccgcacgctggacacagaactgtttttactgccggga
atggctaaccgtcacgggctgattactggcgcaacggggacaggtaaaactgtcacgctg
caaaaactggcggaatctctgtcagaaatcggcgttccggtgtttatggccgatgtaaaa
ggtgatttaaccggggttgcggcagaaggtacggcgtcggaaaaactgctcgcaaggctt
aaaaatatcggcgtaaatgactggcaacctcatactaatccggtggtggtgtgggatatc
tttggcgagaaaggccacccggtgcgggcgacggtttcggatctggggccgctgttgctg
gcgcggctgttgaatctcaacgatgtgcaatctggcgtgctgaatatcattttccgcatt
gctgacgatcagggattgttgctgctcgactttaaagatctgcgggcaattacccagtac
atcggcgataacgccaaatccttccagaatcagtacggtaatatcagtagtgcatcggtt
ggtgccatccagcgcgggctgttgtcgctggaacagcaaggcgcagcacacttatttggt
gagccgatgctggatatcaaagactggatgcgcaccgatgccaacggtaaaggcgttatc
aatatccttagcgccgaaaaactctaccagatgccgaaactgtacgccgccagcctgttg
tggatgctttcagagttgtatgaacaattgccggaagcgggcgatctggagaaaccaaaa
ctggtgtttttcttcgacgaagcgcatctgctgtttaacgatgcaccgcaggtactgctg
gataagattgagcaggtgataaggcttattcgctcaaaaggcgtgggcgtctggttcgtt
tcgcaaaacccgtcagatatcccggataacgtgctcgggcagctcggtaatcgcgttcaa
cacgctttgcgtgcttttacgcctaaagatcagaaagcagtgaaggcagcggcgcaaacc
atgcgccccaatccgacgtttgataccgaaaaggcaatccaggaactggggacgggcgaa
gcgttaatctcgtttctcgatgcgaaaggaagcccttcagtggtggaacgggcgatggtg
attgccccctgttcacgaatggggccggtgacggaagatgagcgcaatggcttggttaac
cactccccggtgtatggcaagtacgaggatgacgtggaccgagaatccgcctatgagatg
ttgcaaaaaggctttcaggccagtatcgagcagcaaaataatcctcccgcgaaagggaaa
gaggtggcggtggatgacggtattctcggtggattgaaggatattttgttcggcactacc
ggaccacgcggcgggaagaaagatggtgtggtgcaaacaatggcaaaaagcgccgcccgc
caggtgacgaatcagattgtgcgcgggatgttggggagtttgctgggggggagaagaagg
taa
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