Eggerthella lenta: Elen_0715
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Entry
Elen_0715 CDS
T00984
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ele
Eggerthella lenta
Pathway
ele03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ele00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Elen_0715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ele03021
]
Elen_0715
03400 DNA repair and recombination proteins [BR:
ele03400
]
Elen_0715
Enzymes [BR:
ele01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Elen_0715
Transcription machinery [BR:
ele03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Elen_0715
DNA repair and recombination proteins [BR:
ele03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Elen_0715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_A_CTD
HHH_5
HHH_XRCC3_RpoA
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ACV54695
UniProt:
C8WMR4
LinkDB
All DBs
Position
896552..900964
Genome browser
AA seq
1470 aa
AA seq
DB search
MTTEFDVSNFDALRISLANAEDVRSWSRGEVKKPETINYRTLKPEKDGLFCEKIFGPTKD
WECACGKYKRVRFKGIVCERCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGSPSRLGYL
LDIAPKELEKVLYFASSIITSVDKEAREEDADELRDELAADLEELDAERDRLVEATRKLS
VDYVPEDDDFVDDVDEDERMTAEEVDEEIADIYEEFNERKALRQDAFDAFMKIEPKQLVP
DEALYREMRLNYRDYFTGGMGAESVRDLLDAMDLAATADELRDVIANGKGQKRAKAIKRL
KVVDAFLKSENKPTDMILDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKR
LLDLGAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQN
LLGKRVDYSGRSVIVVGPQLKLHQCGLPSQMALELFKPFVMKRLVELEYAANIKAAKRAV
DRGASYVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCTAFNADF
DGDQMAVHVPLGAEAQAEARVLMLSANNIKSPAHGRPLTVPTQDMIIGLYYLTAARDGFE
GEGRSFIDFDDAMNAYDARAELDLQAKIWVRLTKDTQVATAFGVFEEHKAGERIETTIGR
ITFNNVLPEDYPYLNYEMNKKEISRLVEDVCNRYELSSVPAILDGLKDAGFHYATRAGVT
VSVYDATVPPNKAEILAAADEKVAAIDEDYEMGLMSPDERHKQVVDIWNAANEEVGEAMA
ENFDKFNPIYMMAFSGARGNIKQIRQLAGMRGLMSDPKGEIIDRPIKANFREGLSVLEYF
ISTHGARKGLADTALRTADSGYLTRRLVDVAQDVIIREIDCGTADGVPYPLHNEKGDVDE
NLIGRCLLNDVAGVDGEVLLAAGEYITHMDQLKAMDAAGVETLVIRTVMTCHAEHGVCQK
CYGWDLATSRPVNIGTAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITHGLPRVQELFE
ARKPKGLAVLAEISGTLQISGDKQSKTITIHDQQGNFREYVVSARAQMLPGVTDGCEVKV
GQQLTKGSVNPHDLLRLTDPNTTLRYIVSQVQGVYVSQGVDINDKHIEVIARQMLRKVAV
MDAGESDFLPGRQVNRFEFEDAANALIAEGKEPPVGQPLLLGITKASLATDSFLSAASFQ
ETTKVLTDAAIEGKIDHLAGLKENVIIGKPIPAGTGLSRYREVGLTYKGRPVSPVVGETL
PDFAPEALRDIEELLPQPQDWSLDGDGYLNMGTNYGSYYSGLSLGHRGPQLSDEDARLYI
YDDLGVSQRWANKFSEAGIETVADLVGHTEEDLLRIEGIGVKAIEELKEGLEAHDLTHVI
EDDLAATSDDMSQLLDMVFSPDDTILIGGDEPPTFNTEGEDMLGEALPPRSYQRNLEELD
ALLGSVGSLGFGLTTKESEEASNADDDVEE
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggaattcgacgtgagcaatttcgacgccctgcgcatctcgctcgccaacgcc
gaggatgtgcgcagctggtcgcgcggcgaggtgaagaagcccgagacgatcaactaccgt
accctcaagcccgagaaggacggcctgttctgcgagaagatcttcggcccgacgaaggac
tgggagtgcgcctgcggcaagtacaagcgcgtgcgcttcaagggcatcgtctgcgagcgc
tgcggcgtcgaggtgacgcgcagcaaggttcgccgcgagcgcatgggccacatcgagctg
gccgccccggtcagccacatatggtacttcaagggctcgccctcgcgtctgggctacctc
ttggacatcgcaccgaaagagctggagaaggtgctgtacttcgcatcctccatcatcacc
tcggtggataaagaggcccgcgaggaggacgccgacgagctgcgcgacgagctggccgcc
gacctcgaggagctggacgccgagcgcgaccgcctcgtggaggccacgcgtaagctgtcc
gtggactacgtgcccgaggacgacgacttcgtcgacgacgtggacgaggacgagcgcatg
acggccgaggaggtcgacgaggagatcgccgacatctacgaggagttcaacgagcgcaag
gcgctgcgccaggacgctttcgacgccttcatgaagatcgagccgaagcagctggtgccg
gacgaggccctctaccgcgagatgcgcctcaactaccgcgactacttcacgggcggcatg
ggcgccgagtccgtgcgcgacctgctggacgccatggacctggcagcgacggccgacgag
ctgcgcgacgtcatcgccaacggcaagggccagaagcgcgccaaggccatcaagcgcctc
aaggtggttgacgcgttcctcaagtccgagaacaagccgacggacatgattctcgacgtc
atcccggtgatcccgcccgacctgcgccccatggtgcagctggacggcggccgcttcgcg
acgtcggacctgaacgacttgtaccgtcgcgtcatcaaccgcaacaaccgcctcaagcgc
ctgctggacctcggcgcgcctgagatcatcgtcaacaacgagaagcgcatgctgcaggag
gccgtcgacagcctgttcgacaacggccgccgcggccgtcctgtcacgggcccgggcaac
cgcccgctgaagtcgctgtccgacatgctcaagggcaagcagggccgcttccgccagaac
ctgctgggcaagcgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctc
aagctgcaccagtgcggcctgccgtcgcagatggcgctggagctgttcaagcccttcgtc
atgaagcgcctggtggagctggagtacgccgccaacatcaaggccgccaagcgcgccgtc
gaccgcggcgccagctacgtgtgggacgtgctggaagaggtcatcaccgagcatcccgtg
ctgctgaaccgcgcacctaccctgcaccgtctgggcatccaggccttcgagccggtgctg
gtcgagggcaaggccatcaagctgcacccgctggtctgcaccgccttcaacgccgacttc
gacggcgaccagatggccgtgcacgtgccgctgggcgccgaggcgcaggccgaggcccgc
gtgctcatgctgtccgccaacaacatcaagtcgccggctcatggccgtccgctgaccgtg
cccacccaggacatgatcatcggcctgtactacctcacggccgcccgcgacggcttcgag
ggcgagggccgctcgttcatcgacttcgacgacgccatgaacgcctacgacgcgcgcgcc
gagcttgacctgcaggccaagatctgggtgcgtctgaccaaggacacgcaggtggccacg
gccttcggcgtgttcgaggagcacaaggcgggcgagcgcatcgagaccaccatcggccgc
atcacgttcaacaacgtgctgcccgaggactacccgtacctcaactacgagatgaacaag
aaggagatcagccgcctcgtcgaggacgtgtgcaaccgctacgagctgtccagcgtgccg
gcgattctcgacggcctcaaggacgcgggcttccactacgccacgcgtgccggcgtcacc
gtttcggtgtacgacgccaccgtgccgccgaacaaggccgagatcctggctgccgccgac
gagaaggtcgcggccatcgacgaggactacgagatgggcctcatgagccccgacgagcgc
cacaagcaggtcgtcgacatctggaacgccgcgaacgaagaagtcggcgaggccatggcc
gagaacttcgacaagttcaaccccatctacatgatggcgttctccggcgctcgaggcaac
atcaagcagatccgccagctggccggtatgcgaggcctcatgtccgacccgaagggcgag
atcatcgaccgcccgatcaaggcgaacttccgcgagggcctgtccgttctggagtacttc
atctccacgcacggcgcccgtaagggtctggccgacaccgcgctgcgtaccgccgactcg
ggctacctgacccgccgtctggtggacgtggcccaggacgtcatcatccgcgagatcgac
tgcggcaccgccgacggcgtgccgtacccgctgcacaacgagaagggcgacgtcgacgag
aacctcatcggccgctgcctgctcaacgacgtggcgggcgtcgacggcgaggtgctgctg
gccgcgggcgagtacatcacccatatggaccagctcaaggccatggacgcggcgggcgtc
gagacgctcgtcattcgcacggtcatgacctgccatgccgagcacggcgtgtgccagaag
tgctacggttgggatctcgccacgtcgcgtccggtgaacatcggcacggcggtgggcatc
atcgccgcccagtccatcggcgagcccggcacccagctgaccatgcgcacgttccacacc
ggcggcgtcgccggcgaggacatcacccacggtctgcctcgtgtccaggagctgttcgag
gcgcgcaagcccaagggcctcgccgtcctcgcggagatctccggcacgctgcagatctcg
ggcgacaagcagtccaagaccatcacgatccacgaccagcagggcaacttccgcgagtac
gtcgtgtcggcgcgcgcccagatgctgcccggcgtgacggacggctgcgaagtgaaggtg
ggccagcagctcaccaagggctcggtgaacccgcacgacctgctgcgcctcaccgatccc
aacacgacgctgcgctacatcgtcagccaggtccagggcgtgtacgtgtcccagggcgtg
gacatcaacgacaagcacatcgaggtcatcgcgcgccagatgctgcgcaaggtggccgtc
atggacgccggcgagtccgacttcctgccgggtcgccaggtgaaccgcttcgagttcgag
gatgccgccaacgcgctcatcgccgaaggcaaggagccgcccgtgggccagccgctgctg
ctgggcatcacgaaggcgtcgctggccacggattcgttcctgtcggccgcctcgttccag
gagacgacgaaggtgctcaccgacgccgcgatcgagggcaagatcgaccacttggccggc
ctcaaggagaacgtcatcatcggcaagccgatcccggcgggtacgggtctgtcgcgttac
cgcgaagtgggcctcacctacaagggtcgtccggtttcgccggtggtgggcgagacgctg
cccgacttcgcgccggaggctctgcgcgatatcgaggagctgctgccccagccgcaggat
tggtcgctcgacggcgacggctacctcaacatgggcacgaactacggcagctactacagc
gggctttcgctgggccatcgcggcccgcagctgtccgacgaggacgcgcgcctgtacatc
tacgacgacctgggcgtgtcgcagcgctgggccaacaagttctccgaggcgggcatcgag
acggtggccgacctcgtgggccacaccgaggaggacctgctgcgcatcgagggcatcggc
gtgaaggccatcgaggagctgaaggaaggcctcgaggcccacgatctgacgcacgtgatc
gaggacgacctcgcggctacgagcgacgacatgtcgcagctgctggacatggtgttctcg
cccgatgacaccatcctcatcggcggcgacgagcccccgaccttcaacaccgagggcgag
gacatgctgggcgaagctttgccgccgcgctcctaccagcgcaacctggaagagctcgac
gctctgctgggctcagtagggtcgctcggcttcggcctgaccaccaaggagtccgaggag
gcttccaacgccgacgacgacgtcgaggaataa
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