Eggerthella lenta: Elen_1185
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Entry
Elen_1185 CDS
T00984
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ele
Eggerthella lenta
Pathway
ele03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ele00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Elen_1185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ele03019
]
Elen_1185
Enzymes [BR:
ele01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Elen_1185
Messenger RNA biogenesis [BR:
ele03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Elen_1185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACV55155
UniProt:
C8WGB4
LinkDB
All DBs
Position
complement(1420341..1421585)
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AA seq
414 aa
AA seq
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MSSTFQDLGLSETTLSAVERMGFTAPTPVQEQAIPLVLEGRDVVAAATTGTGKTAAFALP
LFERIGRAKRPGSPRALVVSPTRELTQQIDAACTQLAKASNRRMLTVMGGTKYKGQIAKL
DRGIDVLVATPGRLYDLMERGVVKLRDVEVLVLDEADRMLDMGFWPTMKKVVAATPSSRQ
TLLFSATLDRKVMQSVSSILKDPAFVEVSHKGETADTIDQFMIPVGPMKKPALLRLVLQQ
RGSKRVIVFADTKTRAEICTGQLKRAGFRADSIHSDKTQVQRKRALEGFSKGAIDVLVAT
DVLARGIDVSNIEYVVNYDLPESPEDYVHRIGRTGRAGETGYAISFVSPEAKAQLLDIEK
LLGERIPTLDIDGYDATEAEKALASQFVPKATVGSAAFSRSLRRNGASGFGRRR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgagttcgacgtttcaagacctcggcctgtccgagacgaccctgtccgccgtcgagcgg
atgggtttcaccgcccccacccccgtgcaggagcaagcgatcccgttggtcctcgaaggt
cgcgatgtcgtggccgccgcgaccaccggcaccggcaagacggccgcgttcgcgctgccc
ctgttcgagcgcatcggccgtgccaagcgcccgggatcgccgcgggcgctcgtcgtgagc
cccacgcgcgagctgacccagcaaatcgacgccgcttgcacgcagctggcgaaagcgtcg
aaccgccgcatgctcaccgtgatgggcggcacgaagtacaaggggcagatcgcgaagctc
gaccgcggcatcgacgtcctcgtggccacgcccggcaggctgtacgacctcatggaacgc
ggcgtcgtcaagctgcgcgacgtggaggtgctcgtgctggacgaggccgaccgcatgctg
gacatgggtttctggcccaccatgaagaaggtcgtggccgccacgccctcttcgcgccag
acgctgctgttctcggcgacgctcgaccgcaaggtcatgcagagcgtgtcctccatcttg
aaggatcccgcgttcgtcgaggtgtcccacaaaggcgagaccgccgacaccatcgaccag
ttcatgatccccgtcggcccgatgaagaagcccgcgctgctgcgcctcgtgctccagcag
cgcggcagcaagcgcgtcatcgtgttcgccgacacgaagacgcgcgccgagatatgcacc
ggccagctgaagcgtgcaggcttccgcgcggactccatccattccgataagacgcaggtg
cagcgcaagcgggcgctcgagggcttcagcaaaggtgccatcgacgtcctcgttgccacc
gacgtgctggcccgcggaatcgacgtgtcgaacatcgagtacgtggtgaattacgatctg
cccgagagccccgaggactacgtgcaccgcatcggccgcacaggccgcgccggcgagacc
ggctacgccatctcgttcgtcagccccgaggcgaaggcgcagctgctcgatatcgagaag
ctgctgggcgagcgcatccccacgctggacatcgacggctacgacgcgacggaggcggag
aaggcgctcgcaagccagttcgtgcccaaggcgacggtgggcagcgcggcgttctcgcgc
tccctgcgccgcaacggcgcaagcggcttcggccgcaggcgctag
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