Eggerthella lenta: Elen_1240
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Entry
Elen_1240 CDS
T00984
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ele
Eggerthella lenta
Pathway
ele03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ele00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Elen_1240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ele03019
]
Elen_1240
Enzymes [BR:
ele01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Elen_1240
Messenger RNA biogenesis [BR:
ele03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Elen_1240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ACV55210
UniProt:
C8WGG9
LinkDB
All DBs
Position
complement(1485267..1486787)
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AA seq
506 aa
AA seq
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MKQFNELGLSDQALEAVARLGYEAPTPVQEQAIPLALEGRDLIAAAKTGTGKTAAFSLPS
LDRLGHAKGGQGPLMLVVTPTRELAQQIGEVCTAIAASTHHRILTVVGGLSYTPQINKLK
HGVDILIATPGRLVDLMEQGAVRLGDVEVLVLDEADRMLDMGFWPAMKKIIGATPASRQT
LLFSATIDASIKNSVGKLLHDPAFVEIAHKGETADTVEQYIVHVAQTLKPALLKAVLAEK
GSDRVIVFARTRSRADSTCRRLKRAGYTAEAIHSDRSQAQRRRALDNFAAGKTGVLVATD
VLARGIDVEEVDYVVNYDLPTQPEDYVHRIGRTGRAGAAGFAVSFVSPETADALRDIEKL
IKRPIPEMEVPSFDAEQAAEEAAGKAARADARRDPEIKQAAKEMAARERKKAKAREQAQA
EDAPKNAPKRKAPKKPVASKGAQPNRQQPGRANAKQGQPGQRSGKPASGGARPAQSSAKK
GGPDLRPGRAHRASLAQQRSRGGKRK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaattcaacgaactcggcctgtccgaccaggctcttgaagccgtcgcgcgcctg
ggctacgaagcgcccacgcccgtccaggagcaggccatccctctcgcgctcgaagggcgc
gacctcatcgccgccgccaagaccggcaccggcaagaccgcggccttctcgctgccctcg
ctcgaccgcctgggccatgccaagggcgggcagggcccgctcatgctcgtggtcaccccc
acgcgcgagctggcccagcagatcggcgaggtgtgcaccgccatcgccgcctccacgcat
caccgcatcctcaccgtggtgggcggcctgtcctacaccccgcagatcaacaagctcaag
cacggcgtggacatcctcatcgccacgccgggccgcctggtcgacctcatggaacagggc
gccgtgcgcctcggcgacgtggaggtgctcgtgctggacgaggccgaccgcatgctggac
atgggcttctggccggccatgaagaagatcatcggcgccacgcccgcctcgcgccagacg
ctgctgttctcggccaccatcgacgcgtccatcaagaacagcgtgggcaagctgctgcac
gacccggcgttcgtcgagatcgcccacaagggcgagacggccgacaccgtagagcagtac
atcgtccacgtggcgcagaccctcaagccggcgctgctcaaggccgtgctggccgagaag
ggctccgaccgcgtcatcgtgttcgcccgcacgcgcagccgcgccgattccacgtgccgc
cgcctcaagcgcgcgggctacaccgccgaggctatccactccgaccgcagccaggcgcag
cgccgccgcgcgctcgacaacttcgccgccggcaagacgggcgtgctcgtggcaaccgac
gtgctggcgcgcggcatcgacgtggaggaagtggactacgtcgtgaactatgacctgccc
acccagcccgaggattacgtccaccgcatcggccgcacgggtcgagcgggcgccgcgggc
ttcgccgtgtcgttcgtaagccccgagacggccgacgcgcttcgcgacatcgagaagctc
atcaagcgccccattcccgagatggaggtgccttcgttcgatgccgagcaggccgccgaa
gaggccgcgggcaaggccgcccgcgccgacgcgcgccgcgaccccgagatcaagcaggcc
gccaaggagatggccgcgcgcgagcgcaagaaggccaaggcccgcgagcaggcgcaggcc
gaagacgcgccgaaaaacgccccgaagcgcaaggcgccgaagaagcccgtcgcgtcgaag
ggcgcccagccgaaccgccagcagccgggccgggcgaacgcgaagcaagggcagcccggc
cagcgcagcggcaagcccgcgtccggaggcgcgcgccccgcgcagtcttcggcgaagaag
ggcggtcccgatctccgtccgggccgcgctcatcgcgccagcctcgcccagcagcgcagc
agaggcggcaagcgcaaatag
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