Eggerthella lenta: Elen_1617
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Entry
Elen_1617 CDS
T00984
Name
(GenBank) RNA binding metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ele
Eggerthella lenta
Pathway
ele03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ele00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Elen_1617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ele03019
]
Elen_1617
Messenger RNA biogenesis [BR:
ele03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Elen_1617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
FUT8_N_cat
ZapG-like
ZT_dimer
KH_2
D5_N
Motif
Other DBs
NCBI-ProteinID:
ACV55585
UniProt:
C8WHJ4
LinkDB
All DBs
Position
complement(1915147..1916679)
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AA seq
510 aa
AA seq
DB search
MPEFIWLIIGAVVGIALGFVVTRYLVNASTKRAAQEAESVVNDAKRQAETLRREAIIEAK
DEALKLKQDAQAESKERLREVRSAENRISQREESLDRRVESLDAREHQISSMQGQLERRE
RDLEEATREVNYRLERVAGMTPDEAKAELLDTLKDEVTHESAAIIRDAEARAKAEADKKA
RSILSLAIQRVAADHSAETTVSTIHIPSDDLKGRIIGREGRNIRSFEQLTGTNLIIDDTP
ECVTISCFDPVRREIGRVTMENLVADGRIHPARIEEMFGKAEAFVNQRVQEAGEQATFDT
GIHDLHPELVRTLGRLRYRTSYGQNVLNHSLEVAYLSGVMASELGLDPIPAKRAGLLHDL
GKAVDHEVEGSHAVIGADLARRFGERPEIVHAIEAHHNDVEPSSVLAVLVQAADAVSAAR
PGARKETLDAYVKRLEKLEEIASSYKGVERTYAIQAGREVRVMVEPDTVDEAATTVLAHD
IAQRIENEMQYPGQVKVVVIRESRAVGVAK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattcatctggctgatcatcggagccgtcgtcggcatcgccctcggcttcgtc
gtcacccgctacctggtcaacgcatccacgaagcgagcggcgcaagaggccgaatccgtg
gtgaacgacgcgaaacgacaagccgaaacgctgcgccgcgaggccatcatcgaagcgaag
gacgaagctctcaagctgaagcaggatgcgcaagccgagagcaaggagcgtctgcgcgaa
gtgcgttccgctgagaaccgcatctcgcagcgcgaggaatcgctcgaccgccgcgtcgaa
tcgctcgacgcgcgcgagcatcagatctcatccatgcagggccagctcgagcgtcgcgaa
cgcgatctcgaagaggccacgcgggaggtgaactaccgcctcgagcgcgtggccggcatg
acgccggacgaggcgaaggcggagctgctcgacaccctcaaggacgaggtgacgcacgag
tccgcggccatcatccgcgatgccgaggcgcgcgcgaaggcggaggccgacaagaaggcc
cgctccatcctcagcctcgccatccagcgcgtggcggccgaccactcggccgaaaccacc
gtgtccaccatccatatcccctccgacgacctcaagggccgcatcatcggccgcgagggc
cgcaacatccgctcgttcgaacagctgaccggaacgaacctcatcatcgacgacaccccg
gagtgcgtgaccatctcgtgcttcgatccggtccgtcgcgagatcggccgcgttacgatg
gagaacctcgtggccgacggccgcatccatccggcgcgcatcgaggagatgttcggcaag
gccgaggcgttcgtgaaccagcgcgtccaggaagcgggcgagcaggccacgttcgacacc
ggcatccacgatctgcaccccgagctcgtgcgcacgctgggccgtctgcgctaccgcacc
tcgtacggccagaacgtgctgaaccactcgctggaggtggcctacctctccggcgtcatg
gcttccgaactggggctggatcccatcccggccaagcgcgccggcctgctgcacgatttg
ggcaaggcggtcgaccacgaggtggagggcagccacgccgtcattggagccgacctggcc
cgccgtttcggcgagcgacccgagatcgtgcacgccatcgaggcgcaccacaacgacgtg
gagccgtccagcgtgctggccgtgctcgttcaggcggccgatgccgtgtccgcggcgcgt
cccggcgcccgcaaggagacactcgacgcctacgtgaagcgcctcgagaagctggaggag
atcgccagctcgtacaagggcgtggagcgcacgtacgccattcaggcgggtcgcgaggtg
cgcgtgatggtggagcccgacacggtggacgaagccgccaccacggtgcttgcgcacgac
atcgcgcagcgcatcgagaacgagatgcagtatcccggccaggtgaaggtcgtggtcatc
cgcgagagccgcgcggtcggcgtcgcgaagtag
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