Eggerthella lenta: Elen_2615
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Entry
Elen_2615 CDS
T00984
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ele
Eggerthella lenta
Brite
KEGG Orthology (KO) [BR:
ele00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ele03016
]
Elen_2615
Enzymes [BR:
ele01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Elen_2615
Transfer RNA biogenesis [BR:
ele03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Elen_2615
Prokaryotic type
tRNA splicing ligases
Elen_2615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ACV56567
UniProt:
C8WLV4
LinkDB
All DBs
Position
3043828..3044937
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AA seq
369 aa
AA seq
DB search
MNDLKIYAQNLESAAMEQIETLANAPAFEGAKIRIMPDAHAGAGCVIGFTANLGDKVVPN
LVGVDIGCGMLTSRIEFIEECHLDEFDEVVKKSVPSGFAVHNVQTCDIDAMGLLCRNELQ
NVARLERSMGTLGGGNHFVEIDAAGNGDAYLVVHSGSRNLGLQVANIYQRMAVETCKEPT
PKGLEYLTGELRDAYLHDMHLCERWAGLNREAMMHAIYREARLGVLMGGTFHTVHNYIGN
DGIVRKGAISAQEGERVLIPLNMRDGSVLGIGRGNEDWNNSAPHGAGRAMSRAKAKRELS
VDGFREQMANVYSSTVCEGTLDEAPDAYKPAEQIVDALYPTVKVEKRLYPVYNFKAVEQK
RERRARHEG
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatttgaagatatacgcgcaaaacctcgaatcagccgcgatggagcagatcgag
acgctcgcgaacgcgccggcgttcgagggcgcgaagattcgcatcatgcccgatgctcac
gctggcgcgggctgcgtcatcggcttcacggcaaacctcggggataaggtggtgcccaac
ctcgtgggcgtcgatatcggatgcgggatgctgacttcgcgcatcgaattcatcgaggaa
tgccacctcgacgagttcgacgaggtggtgaagaagagcgtgccgtcaggattcgccgtg
cacaacgtccagacgtgcgacattgacgcgatggggcttctatgccgcaacgagctgcag
aacgtcgcacgccttgagcgcagcatggggacgcttggaggcgggaaccacttcgtcgag
atcgacgccgccggcaacggcgacgcgtacctcgtcgtgcactccggctcccgaaacctc
ggactgcaagtcgccaacatctaccagcgaatggccgtcgagacgtgcaaggagccgacg
ccgaagggcctcgaatacctcaccggtgagcttcgcgacgcctacctccacgatatgcac
ctgtgcgagcgatgggcggggctgaaccgagaggcgatgatgcacgcaatataccgcgag
gctcgattgggcgtcttgatgggagggacgttccacaccgtccacaactacatcggcaac
gacggtatcgtgcgcaagggagcgatcagcgcgcaggagggcgaacgcgtgctcattccg
ctcaatatgcgcgacggctcggtgctcggcataggacgcggcaacgaggattggaacaac
tcggcaccgcacggggccggccgcgccatgagccgcgccaaggcgaagcgcgagctgtcc
gtcgatggcttccgggagcagatggcgaacgtctactcgtccactgtgtgcgaaggcacg
ctcgacgaggcacccgacgcgtacaagccggcggagcagatcgtcgatgcgctctaccca
accgtcaaggtggagaagcgcctgtaccccgtctacaacttcaaggccgtggagcagaag
cgcgaaaggcgggcacgtcatgaaggctaa
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