Escherichia coli LF82: LF82_0066
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Entry
LF82_0066 CDS
T00854
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
elf
Escherichia coli LF82
Pathway
elf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LF82_0066 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elf03400
]
LF82_0066 (alkA)
Enzymes [BR:
elf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LF82_0066 (alkA)
DNA repair and recombination proteins [BR:
elf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LF82_0066 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CAP76575
LinkDB
All DBs
Position
complement(2162724..2163572)
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AA seq
282 aa
AA seq
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MYTLNWQPPYDWSWMLGFLAARAVSGVETVADSYYARSLAVGEYRGVVTAIPDIARHTLH
INLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGKLGAARPGLRLPGCVDAFEQGVRA
ILGQLVSVAMAAKLTSRVAQLYGERLDDFPDYVCFPTPQRLAVADLQALKALGMPLKRAE
ALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtataccctgaactggcagccgccgtatgactggtcgtggatgttgggatttctcgcc
gcccgtgcggtgagcggcgtggaaacggtcgcggacagttattatgcccgtagtctggcg
gtaggcgaatatcgcggcgtggtgactgctattccggatatagcccgccatactctgcac
ataaatttaagtgcaggtttagaacctgttgccgcagagtgtctggcgaaaatgagccgc
ctgtttgatctgcaatgtaacccgcagattgttaacggtgcgttgggcaagttaggcgcg
gcgcggccaggattgcgtttacctggttgtgttgacgcttttgagcagggcgtgcgggcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgacctccagagtggcacag
ctttatggcgaacggctggatgattttccggattatgtctgcttccccacgcctcagcgg
ctggcagtagccgacctgcaggcattaaaagcgttaggtatgccgttgaaacgggcagag
gcgctgattcatctggcaaatgcggcgctggagggcaccttaccaatgacaataccgggc
gacgtagaacaagcgatgaaaacgctgcaaacctttccgggtatcgggcgctggactgca
aattattttgctttgcgtggctggcaggcgaaagatgtttttctgccggatgattatctg
attaaacagcgatttccgggaatgacgccggcacaaatccgccgttatgccgaacgctgg
aagccctggcgttcttatgcgctgttgcatatctggtatacggaaggctggcaaccagac
gaagcatga
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