KEGG   Escherichia coli LF82: LF82_0381
Entry
LF82_0381         CDS       T00854                                 
Symbol
csrD
Name
(GenBank) Uncharacterized protein yhdA
  KO
K18765  RNase E specificity factor CsrD
Organism
elf  Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:elf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:elf03019]
    LF82_0381 (csrD)
Messenger RNA biogenesis [BR:elf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     LF82_0381 (csrD)
SSDB
Motif
Pfam: EAL GAPES4 GGDEF GDPD
Other DBs
NCBI-ProteinID: CAP77704
LinkDB
Position
complement(3436079..3438019)
AA seq 646 aa
MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFST
LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGTNDLFRELSVPLIKHPGMSLR
LVYQDPMGNYFHSLMTTAPLTGAIGFIILMLFLAVRWLQRQLAGQELLETRATRILNGER
GSNVLGTIYEWPPRTSSALDTLLCEIQNAREQHSRLDTLIRSYAAQDMKTGLNNRLFFDN
QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFSLTNLLSTFMMRYPGAL
LARYHRSDFAALLPHRTLKEAESIASQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT
EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL
AIQVTVESLIRPRFQRWLRDTLMQCEKSQRRRIIIELAEADVGQHISRLQPVIRLVNALG
VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV
YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgagattaacgacgaaattttcggcctttgtcacgctgctcaccgggttaacaattttt
gtgactttgctgggctgttcgctaagtttctacaacgccattcagtataagtttagtcat
cgtgttcaggcggtggcgacggcgattgatacccacctagtgtcgaatgacttcagcaca
ttaaggccacaaattaccgaattaatgatgtcggcagatatcgttcgtgtagacctgctc
catggtgataagcaggtttataccctggccagaaatggtagttatcgtccggttggcacc
aacgatctgtttcgtgaactgagcgttccgttgataaagcatccggggatgtcgctgcgt
ctggtttatcaggatccgatgggcaactatttccattctttaatgactaccgcgccgctc
acgggggcgattggctttatcattcttatgctcttcctggcggtacgctggttacaacgg
caacttgccgggcaagaattgctggaaacccgggctactcgtatcttaaacggtgagcgt
ggctctaatgtgttgggaaccatctatgaatggccgcccagaaccagcagtgcgctggat
acgctgctttgtgaaattcagaacgcacgcgaacaacacagccgtcttgatacgctgatc
cgctcttatgccgcccaggacatgaaaaccggcctcaataaccgactctttttcgataat
cagttagcaacgttactggaagatcaagagaaagttggtacccacgggatcgtgatgatg
attcgtctgccggatttcaatatgttgagtgatacctgggggcacagccaggttgaagaa
cagttcttctctctgacgaatctgctatcgacatttatgatgcgctaccctggcgcactg
ctggcgcgttaccaccgcagtgattttgctgcgctgttaccgcaccggacgttaaaagag
gcagagagcatcgccagtcagttaatcaaagccgtcgataccttgccgaacaataaaatg
ctcgatcgcgacgatatgatccacattggtatctgtgcctggcgtagtggtcaggatacc
gagcaggtaatggaacatgcagagtctgccacgcgtaatgcgggattgcagggcggcaat
agctgggctatttacgatgactcgttgcctgaaaaaggacgcggtaatgttcgctggcgt
acgcttatcgagcaaatgctcagtcgcggcggcccgcgcctttatcaaaaaccggcggtt
actcgcgaaggccaggttcatcatcgtgaactcatgtgccgcatcttcgatggtaatgaa
gaggttagctcggcagagtatatgccgatggtcttgcagtttggtttatcggaagagtat
gaccgcctgcaaatcagccgtcttattccactattgcgttactggccagaggaaaatctg
gcgattcaggttaccgttgagtcgctgattcgcccgcgttttcagcgttggctgcgcgat
acgttaatgcaatgtgaaaaatcgcaacgaagacgcataattattgaacttgcagaggcc
gatgttggtcaacatatcagtcgcttacaacctgttattcgtttagtgaatgctttaggg
gtacgggtagccgtcaaccaggctggtttgacgctggtaagcaccagttggatcaaagaa
cttaatgttgagttactcaagctccatccggggctagtcagaaacattgagaagcgaacg
gagaaccagctgctggttcaaagcctggtggaagcctgctccgggaccagcacccaggtt
tacgccaccggcgtacgttcgcgaagcgagtggcagaccctgattcagcgcggtgttaca
ggtgggcaaggggattttttcgcgtcctcacagccacttgatactaacgtgaaaaaatat
tcacaaagatactcggtttaa

DBGET integrated database retrieval system