Escherichia coli LF82: LF82_0812
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Entry
LF82_0812 CDS
T00854
Symbol
gatR
Name
(GenBank) Galactitol utilization operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
elf
Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elf03000
]
LF82_0812 (gatR)
Transcription factors [BR:
elf03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
LF82_0812 (gatR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
CoA_trans
HTH_PafC
CggR_N
HTH_5
FeoC
DUF977
SelB_WH_2nd_bact
MarR
DsrD
Motif
Other DBs
NCBI-ProteinID:
CAP76594
LinkDB
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Position
complement(2189702..2190475)
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AA seq
257 aa
AA seq
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MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM
SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAK
NITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADG
IDAVNGITTFNEGYSVSGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDAVS
EVDKLALQKTRVKLITV
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattcgagcgaaggaataagatcatccaattagtgaatgaacagggaaccgtg
cttgttcaggatctggcgggagtatttgctgcctcggaagcgacaatccgtgccgatttg
cgctttctcgaacaaaaaggcgtggttacgcgctttcatggcggtgcggcgaaaataatg
tccggtaatagcgaaaccgagacccaggaagtcgggtttaaagagcgatttcagctcgcc
agcgcgccgaaaaacagaatagcgcaggcggcagtcaaaatgatccacgaagggatgacc
gttattctcgacagcggaagtacgacaatgcttatcgccgaaggattaatgaccgccaaa
aatatcacggtgattaccaacagtctcccggctgcgtttgccctttccgaaaataaagac
attactctggtcgtctgcggtggcacggtccgccataaaacgcgatctatgcatggatct
attgctgaacgttctctgcaggatattaatgccgatttaatgtttgtgggtgctgatggt
attgatgcggttaatggtattacgacctttaatgaaggttattctgttagcggtgcgatg
gtcaccgctgctaataaagtgattgccgttctcgattcatcgaaatttaaccgtcgcggt
tttaatcaggtactgccaatcgaaaaaattgacattattattaccgatgatgctgtgtct
gaggtggataaactggcattgcagaagacacgggtaaaattaattacggtgtag
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