KEGG   Escherichia coli LF82: LF82_088
Entry
LF82_088          CDS       T00854                                 
Name
(GenBank) hypothetical protein
  KO
K15342  CRISP-associated protein Cas1
Organism
elf  Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:elf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:elf03400]
    LF82_088
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:elf02048]
    LF82_088
DNA repair and recombination proteins [BR:elf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     LF82_088
Prokaryotic defense system [BR:elf02048]
 CRISPR-Cas system
  Universal Cas proteins
   LF82_088
SSDB
Motif
Pfam: Cas_Cas1 Cadherin_CELSR2_9th
Other DBs
NCBI-ProteinID: CAP75351
LinkDB
Position
878063..879046
AA seq 327 aa
MSSNYLTPSDLKTILHSKRANIYYLEKCRVQVNGGRVEYVTSEGKESYYWNIPIANTTAL
MLGMGTSVTQAAMREFAHAGVMVGFCGTDGTPLYSANEVDVDVSWLSPQSEYRPTEYLQQ
WVSFWFVEDKRLAAAKRFQLIRLTHIDKHWSSSKMLREHAFQPDVNALHTLLNRTCEEID
AAENHTQLMLVEAKLTKALYKMVSQTVGYGDFTRAKRGGGIDMANRFLDQGNYLAYGLAA
VAAWVTGIPHGLAVMHGKTRRGGLVFDLADLIKDALVMPQAFIAAMAGEDAQEFRQRCVN
IFQQADALDVMITSLQETAQALAKADQ
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtcttcgaattaccttacgccttccgatctcaaaaccattctccactccaaacgcgcc
aatatttattatctggaaaaatgccgggtacaggtgaatggtgggcgggtggagtatgtt
accagcgaaggtaaagagtcgtactactggaatatccccattgcgaataccacggcgttg
atgctgggaatgggaacttccgttacccaggcggcgatgcgtgaatttgctcatgccggg
gtgatggtaggcttttgtggtacggatggcacgccgctgtattcagcaaatgaagtggat
gttgatgtctcctggctcagcccacaaagtgaatatcgccctacagagtatctccagcag
tgggtttctttctggtttgttgaagacaaacgacttgctgccgcgaaacgttttcagtta
atccgcctgacacatatcgataagcactggtccagctcgaaaatgctgcgtgaacacgca
tttcaacctgatgttaatgcgctgcataccctcctgaatcgtacttgtgaagaaatagac
gcggcagaaaaccatacgcagcttatgctcgttgaggccaaattgactaaagcgttatac
aaaatggtcagtcaaaccgtggggtatggcgatttcactcgcgcaaaacggggcggtggt
atcgatatggccaaccgcttcctcgatcaagggaattatctggcttatggactggcagca
gtggcggcgtgggtaacaggtatcccgcacggtttagctgtaatgcatggtaagacacgt
cgcggcgggcttgtttttgaccttgccgatctgattaaagatgctcttgttatgccgcaa
gcatttattgccgcaatggcgggagaagatgctcaggagtttcgtcaacgctgtgttaat
atctttcaacaagcggatgcgctggatgtcatgatcacctctctgcaggaaacggcccag
gcactggctaaggctgaccaatga

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