Escherichia coli LF82: LF82_1626
Help
Entry
LF82_1626 CDS
T00854
Symbol
pgaB
Name
(GenBank) biofilm PGA synthesis lipoprotein pgaB
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
elf
Escherichia coli LF82
Pathway
elf02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
LF82_1626 (pgaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
GHL10
A-sol_ELP1
Motif
Other DBs
NCBI-ProteinID:
CAP75523
LinkDB
All DBs
Position
complement(1067713..1069731)
Genome browser
AA seq
672 aa
AA seq
DB search
MLRNGNKYILMLVSIIMLTACISQSRTSFIPPQDRESLLAEQPWPHNGFVAISWHNVEDE
AADQRFMSVRTSALREQFAWLRENGYQPVSIAQIREAHRGGKPLPEKAVVLTFDDGYQSF
YTRVFPILQAFQWPAVWAPVGSWVDTPADEQVKFGDEMVDREYFATWQQVREVARSRLVE
VASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTK
AEVNPHVFVWPYGEANGIAIAELKKLGYDMFFTLESGLANASQLDSIPRVLIANNPSLKE
FAQQIITVQEKPLQRVMHIDLDYIYDENRQQMDRNIDVLIQRVKDMQISTVYLQAFADPD
GDGLVKEVWFPNRLLPMKADIFSRVAWQLRTRSGVNIYAWMPVLSWDLDPTLTRVKYLPT
GEKKAQIHPEQYRRLSPFDDRVRAQVGMLYDDLAGHAAFDGILFHDDALLSDYEDASAAA
IAAYQQAGFSGSLSEIRQNPEQFKQWTRFKSRALADFTLELSARVKAIRGPHVKTARNIF
ALPVIQPESEAWFAQNYADFLKSYDWTAIMAMPYMEGVTEKSADQWLIQLTNQMKSIPQA
KDKSILELQAQNWQKNGQHQAISSQQLAHWMSLLQLNGVKNYGYYPDNFLHNQPEIDVIR
PEFSTAWYPKND
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtaatggaaataaatatatcctgatgctggtgagtataattatgctcactgcg
tgcattagccagtcaagaacatcatttataccgccacaggatcgcgaatctttactcgcc
gagcaaccgtggccgcataatggttttgtggcgatttcatggcataacgttgaagacgaa
gctgccgaccagcgttttatgtcagtgcggacatcagcactgcgtgaacaatttgcctgg
ctgcgcgagaacggttatcaaccggtcagtattgctcaaattcgtgaagcacatcgagga
ggaaaaccgctaccggaaaaagcagtagtgctgacttttgatgacggctaccagagtttt
tatacccgcgtcttcccaattcttcaggccttccagtggcctgctgtatgggcccccgtc
ggcagttgggtcgatacgccagcggatgaacaagtaaaatttggcgatgagatggtcgat
cgagaatattttgccacgtggcaacaagtgcgagaagttgcgcgttcccggctcgttgag
gtcgcttctcatacatggaattctcactacggtattcaggctaatgccaccggcagctta
ttgcctgtatatgtaaatcgtgcatattttactgaccacgcacggtatgaaaccgcagca
gaataccgggaaagaattcgtctggatgctgtaaaaatgacggaatacctgcgtacaaag
gctgaggtaaatccacacgtttttgtttggccttatggcgaagcgaatggcatagcaatc
gcggaattaaaaaaactcggttatgacatgttcttcacccttgaatcaggtttggcaaat
gcgtcacaattagattccattccgcgagtattaatcgccaataatccctcattaaaagag
tttgcccagcaaattattaccgtacaggaaaaaccactacaacgggtaatgcatatcgat
cttgattacatttatgacgaaaaccgccagcaaatggatcgcaatattgatgtgctaatt
cagcgggtaaaagatatgcaaatatctaccgtgtatttacaagcatttgctgatcccgat
ggtgatgggctggttaaagaggtctggtttccaaatcgtttgctaccaatgaaagcagat
atttttagtcgggttgcctggcaattgcgtacccgctcaggtgtaaacatctatgcgtgg
atgccggtattaagctgggatttagatcccacattaacgcgagtaaaatacttaccaact
ggggagaaaaaagcacaaattcatcctgaacaataccgccgtctctctcctttcgatgac
agggtcagagcacaagttggcatgttatatgatgatcttgccggacatgctgcttttgat
ggcatattgttccacgatgatgctttgctttcagattatgaagatgccagtgcagcggct
atcgcggcttatcagcaagctggctttagcgggagtctgagcgaaattcgacaaaacccg
gagcaatttaaacagtggacccgctttaaaagtcgtgcgttagctgacttcactttagaa
cttagtgcgcgcgtaaaagccattcgtggtccacatgttaaaactgcacgaaatattttt
gcacttccggtaatacaacctgaaagtgaagcctggtttgcacagaattatgctgatttc
ctaaaaagctatgactggaccgctattatggctatgccttatatggaaggcgtcacagaa
aaatcggctgatcaatggttaatacaattgaccaatcagatgaaaagcatcccgcaggct
aaagacaaatcaattttagaattacaggcacaaaactggcagaaaaatggtcagcatcag
gctatttcttcacaacaactcgctcactggatgagcctattacaactgaatggagtgaaa
aattatggttattatcccgacaattttctgcataaccaacctgaaatagacgttattcgt
cctgagttttcaacagcctggtatccgaaaaatgattaa
DBGET
integrated database retrieval system
