Escherichia coli LF82: LF82_1908
Help
Entry
LF82_1908 CDS
T00854
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
elf
Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
elf03016
]
LF82_1908 (rnd)
Enzymes [BR:
elf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LF82_1908 (rnd)
Transfer RNA biogenesis [BR:
elf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LF82_1908 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
CAP76292
LinkDB
All DBs
Position
complement(1850830..1851945)
Genome browser
AA seq
371 aa
AA seq
DB search
MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWS
PLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEE
YSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECR
LMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHL
WSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQALPEEALPQPMLNLMDMPGYR
KAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAE
ALHNLLQEYPQ
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgattaccacggacgatgcgctggcttctttgtgtgaagccgtccgtgcctttccggcg
atagccctggatactgaatttgttcgtacgcgcacttattacccgcagctgggtttaatt
caactttttgatggtgagcatctggcgctaatcgatccactcgggatcaccgactggtca
ccgctgaaagcgatcctgcgcgatccgtccatcacaaaatttcttcatgcaggtagtgaa
gatctggaagtgttcctcaatgtctttggcgaattaccacaacccttgattgacacgcaa
atccttgctgccttctgcggacgcccgatgtcatggggtttcgcttccatggtggaagag
tattccggcgttacgctggacaagagtgaatcgcgcaccgactggctggccagaccgctg
accgaacgtcagtgtgaatatgcagcggcggatgtctggtatctgttaccgatcaccgca
aagcttatggtagaaacggaggcctccggctggctacctgcggcgctggatgaatgccgc
ctgatgcaaatgcgtcgtcaggaagtcgttgcgccggaagacgcctggcgtgatatcacc
aatgcctggcaattacgcacacgccaactggcctgtctgcaactgttagccgactggcga
ttgcgcaaggcgcgagagcgcgatctggcggtgaactttgtcgtgcgtgaagagcatttg
tggtcggtagcgcgttatatgccgggaagtctgggcgaactggacagcctgggcttatcc
ggtagcgaaatccgcttccacggtaaaacgttgctggcgctggtggaaaaagcgcaggca
ttgccggaagaggccttaccgcagccgatgcttaacctgatggacatgccgggttatcgt
aaagcgtttaaagcgattaagtcgctgattactgacgtcagcgaaacgcacaagatcagc
gccgaattgctggcatcgcgtcggcaaatcaaccaactgctgaactggcactggaaactg
aaaccgcagaacaatttgccggagctgatttccggctggcgtggtgagctgatggcggaa
gcattacacaatttattgcaggaatatccacagtaa
DBGET
integrated database retrieval system
