Escherichia coli LF82: LF82_2022
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Entry
LF82_2022 CDS
T00854
Symbol
rsmB
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
elf
Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elf03009
]
LF82_2022 (rsmB)
Enzymes [BR:
elf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LF82_2022 (rsmB)
Ribosome biogenesis [BR:
elf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LF82_2022 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_37
FtsJ
Methyltransf_25
MTS
Methyltransf_5
Methyltransf_15
Cons_hypoth95
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
CAP77740
LinkDB
All DBs
Position
3478313..3479602
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AA seq
429 aa
AA seq
DB search
MKKQRNLRSMAAQAIEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDW
LINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLING
VLRQFQRQQDELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRVNR
THHSRDSWLALLDEAGMKGFPHADYPDAVQLETPAPVHALPGFEEGWVTVQDASAQGCMT
WLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVLAVDIDEQRLSRVYDNLKRLGMKATVK
QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI
WSHLKSGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDG
FFYAKLIKK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaacgtaatttacgtagcatggcggcccaggccattgaacaagtcgttgag
caagggcaatcactgagcaacattctgccaccgctccagcaaaaagtttccgataaagat
aaagctcttctccaggagttatgctttggcgtactgcgtacgctctcacagttagactgg
ctgattaataagctaatggcccgtccgatgacaggcaaacagcgtactgttcattacctg
attatggttggtttgtatcaactgctttatacccgcattccacctcatgccgcgctggct
gaaacggttgaaggcgcagttgcaattaagcgcccgcaacttaagggattgattaacggt
gtattacgtcagttccagcgtcagcaagatgagttattagccgagtttaatgccagtgat
gcacgttatctgcatccttcctggttgctgaagcgtctgcaaaaggcgtatcccgagcag
tggcaatccatcgtcgaagccaataaccagcgtccgccaatgtggctgcgcgttaatcgt
acgcatcattcccgcgacagctggcttgcattgctggatgaagcaggaatgaaaggtttc
ccgcatgcggattaccctgatgctgtacagctggaaacacctgcacctgttcatgcgcta
cccggttttgaagaaggatgggttaccgttcaggatgcttcagcacaaggttgcatgacc
tggcttgctccacaaaatggtgaacacattctggatctttgcgccgccccaggcggtaaa
acaacgcatattcttgaggttgctccagaggcgcaagttctggcggtcgatattgatgag
cagcgcctctctcgcgtttacgacaatttaaaacgccttggtatgaaggcgaccgtgaaa
caaggcgatggccgctacccttcccaatggtgtggcgagcaacagttcgatcgcatttta
ttagatgcgccttgttcagcaacgggggtgattcgtcgccatccggatattaaatggtta
cgtcgtgatcgcgatatcccggaactcgcgcaattgcagtctgaaattctcgacgccatc
tggtcgcatttaaaatccggaggaaccctggtctatgccacctgttcggtgttaccggaa
gagaatagcctgcagattaaagcctttttgcaacgtaccgctgatgccgaactttgcgaa
acaggaacaccagagcaaccgggtaaacaaaatttgcccggtgccgaagagggcgacggc
ttcttttacgctaagctaatcaaaaagtga
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