Escherichia coli LF82: LF82_2089
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Entry
LF82_2089 CDS
T00854
Symbol
sbcC
Name
(GenBank) exonuclease sbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
elf
Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elf03400
]
LF82_2089 (sbcC)
DNA repair and recombination proteins [BR:
elf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LF82_2089 (sbcC)
Archaeal homologous recombinant proteins
LF82_2089 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
nSTAND_NTPase5
SMC_N
AAA_15
ABC_tran
cobW
nSTAND3
AAA_21
NTPase_1
AAA_14
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
CAP74931
LinkDB
All DBs
Position
complement(416175..419318)
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA
DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLITAQQ
QEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA
EHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRFRQ
WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVASALAQHAE
QRPLRQRLVALHGQIVPQQKRLAQLQVAIQNVTLEQTQRNAALNEMRHRYKEKTQQLADV
KTICEQETRIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQARLLTLEKEVK
KLGEEVATLRGQLDALTKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQP
WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQE
DEEESWLATRQQEAQSWQHRQNELTALQNRIQQLTPILETLPQSDELPHSEETVVLENWR
QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT
QLEQLKQNLENQRRQAQTLVIQTAETLTQHQQHRPGGLSLTVTVEQIQQELAQTQQKLRE
NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG
LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLESAFAMK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctgaactcattaaaaggcgaatggaagatt
gatttcacccgcgagccgttcgccagcaacgggctgtttgctattaccggcccaaccggt
gcggggaaaaccaccctgctggacgccatttgtctggcgctgtatcacgaaaccccgcgc
ctctctaacgtttcacaatcgcaaaatgatctcatgacccgcgataccgccgaatgtctg
gcggaagtggagtttgaagtcaaaggtgaagcgtatcgcgcgttctggagccagaatcgg
gcgcgtaaccagccggacggtaatttgcaggtgccacgcgtagagctggcgcgctgtgca
gacggcaaaattctcgccgacaaagtgaaagataagctggaactgacggcgacgttaacc
ggactggattacgggcgcttcacccgttcgatgctgctttcgcaggggcaatttgctgcc
ttcctgaatgccaaacccaaagaacgcgcagaattgctcgaggagttaaccggcactgaa
atctacgggcaaatctcggcgatggtttttgagcagcacaaatcggcccgcacagagctg
gagaagctgcaagcgcaggccagcggcgtcgcgttgctcacgccggaacaagtgcaatcg
ctgacagcgagtttgcaggtacttactgacgaagaaaaacagttaattaccgcgcagcag
caagaacaacaatcgctaaactggttaacgcgtctggacgaattgcagcaagaagccagc
cgccgtcaacaggccttgcaacaggcattagccgaagaagaaaaagcgcaacctcaactg
gcggcgctcagtctggcacaaccggcacgaaaccttcgtccgcactgggaacgcatcgca
gaacacagcacggcgctggcgcatactcgccagcagattgaagaagtaaatactcgctta
cagagcacaatggcgcttcgtgcgagcattcgccaccacgcggcgaagcagtcagcagaa
ttacagcagcagcaacaaagcctgaatgcctggttacaggaacacgaccgcttccgtcag
tggaacaacgaactggcgggttggcgtgcacagttctcccaacaaaccagcgatcgcgag
catctgcggcaatggcagcaacagttaactcatgctgagcaaaaacttaatgcgcttgcg
gcgatcacgttgacgttaaccgccgatgaagttgctagcgccctggcgcaacatgctgag
caacgcccactgcgtcagcgcctggtcgcactgcatgggcagattgttccccaacaaaaa
cgtctggcgcagttacaggtcgctatccagaatgtcactctggaacagacgcaacgtaat
gccgcacttaacgaaatgcgccatcgttataaagaaaaaacgcaacaacttgccgatgtg
aaaaccatttgcgagcaggaaactcgcattaaaacgctggaagcccagcgcgcgcagtta
caagcgggtcagccttgtccactttgtggttccaccagccacccggcggtcgaggcgtat
caggcgctggaaccgggcgttaatcaggcccggctattaacgctggaaaaagaagtgaaa
aagctcggcgaagaagttgcgacgctacgtgggcaactggacgccttaacaaagcaactt
cagcgtgatgaaaacgaagcgcaaagcctccgacaagatgagcaagcacttactcaacaa
tggcaagccgtcacggccagcctcaatatcaccttgcagccacaggacgatattcaaccg
tggctagatgcacaagatgagcacgaacgccagctgcgattactcagccaacggcatgaa
ttacaagggcagattgccgcgcataatcagcaaattatccagtatcaacagcaaattgaa
caacgccagcagcagctcttaacggcattggcgggttatgcactgacattgccacaggaa
gatgaagaagagagctggttggcgacgcgtcagcaagaagcgcagagctggcagcatcgc
cagaacgaattaaccgcgctgcaaaaccgtattcagcaactgacgccgattctggaaacg
ttgccgcaaagtgatgaactcccgcacagcgaagaaactgtggtgctggaaaactggcgg
caggttcatgaacaatgtctcgcattacacagccagcagcagacgttacagcaacaggat
gttctggcggcgcaaagtctgcaaaaagcccaggcgcagtttgacaccgcgctacaggcg
agcgtctttgacgatcagcaggcgttccttgcggcgctaatggatgaacaaacactaacg
cagctggaacagctcaagcagaatctggaaaaccagcgccgtcaggcgcaaacgctggtc
attcagacagcagaaacgctgacacagcatcagcaacaccgacctggcgggttatctctc
actgtgacggtggagcagattcagcaagagttagcgcaaactcagcaaaagttgcgtgaa
aacaccacgagtcaaggcgagattcgccagcagctgaagcaggatgcagataaccgtcag
caacaacaaaccttaatgcagcaaattgctcaaatgacgcagcaggttgaggactgggga
tatctgaattcgctaataggttccaaagagggcgataaattccgcaagtttgcccaaggg
ctgacgctggataatttagtccatctcgctaatcagcaactcacccggctacacgggcgc
tatctgttacagcgcaaagccagcgaagcgctggaagttgaggttgttgatacctggcag
gctgatgcggtacgcgatacccgtaccctttccggcggcgaaagtttcctcgtcagtctg
gcgctggcactggcgctttcagatctggtcagccataaaacgcgtattgactcgctgttc
cttgatgaaggttttggcacgctggatagcgaaacgctggataccgcccttgatgcgctg
gatgccctgaatgccagtggcaaaaccatcggtgtgattagccacgttgaagcgatgaaa
gagcgtattccggtgcagatcaaagtgaagaagatcaatggactgggctacagcaaactg
gaaagtgcgtttgcaatgaaataa
DBGET
integrated database retrieval system
