Escherichia coli LF82: LF82_242
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Entry
LF82_242 CDS
T00854
Name
(GenBank) fimbrial usher protein
KO
K07347
outer membrane usher protein
Organism
elf
Escherichia coli LF82
Pathway
elf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LF82_242
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
elf02000
]
LF82_242
02044 Secretion system [BR:
elf02044
]
LF82_242
02035 Bacterial motility proteins [BR:
elf02035
]
LF82_242
Transporters [BR:
elf02000
]
Other transporters
Pores ion channels [TC:
1
]
LF82_242
Secretion system [BR:
elf02044
]
Chaperone-usher system
Type 1 pilus assembly protein
LF82_242
Bacterial motility proteins [BR:
elf02035
]
Pilus system
Fimbrial proteins
LF82_242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
PEGA
Motif
Other DBs
NCBI-ProteinID:
CAP75986
LinkDB
All DBs
Position
complement(1540946..1543597)
Genome browser
AA seq
883 aa
AA seq
DB search
MTAFRAAFKAYRMHQVLILPRFARLTFALGLATAVFPVDAEYYFNPRFLSNDLAESVDLS
AFTKGREAPPGTYRVDIYLNDEFMASRDITFIADDNNADLIPCLSTDLLVSLGIKKSALL
DNKEHSAEKHVPDNSACTPLQDRLADASSEFNVGQQHLSLSVPQIYVGRMARGYVSPDLW
EEGINAGLLNYSFNSNSINNRSNHNAGKSNYAYLNLQSGINIGSWRLRDNSTWSYNSGSS
NSSDSNKWQHINTSAERDIIPLRSRLTVGDSYTDGDIFDSVNFRGLKINSTEAMLPDSQH
GFAPVIHGIARGTAQVSVKQNGYDVYQTTVPPGPFTIDDINSAANGGDLQVTIKEADGSI
QTLYVPYSSVPVLQRAGYTRYALAMGEYRSGNNLQSSPKFVQASLMHGLKGNWTPYGGMQ
IAEDYQAFNLGIGKDLGLFGAFSFDITQANTTLADDTRHSGQSVKSVYSKSFYQTGTNIQ
VAGYRYSTQGFYNLSDSAYSRMSGYTVKPPTGDTSEQTLFIDYFNLFYSKRGQEQISISQ
QLGNYGTTFFSASRQSYWNTSRSDQQISFGLNVPFGDITTSLNYSYSNNIWQNDRDHLLA
FTLNVPFSHWMRTDSQSAFHNSNASYSMSNDLKGGMTNLSGVYGTLLPDNNLNYSVQVGN
THGGNTSSGTSGYSSLNYRGAYGNTNVGYSRSGDSSQIYYGMSGGIIAHADGITFGQPLG
DTMVLVKAPGADNVKIENQTGIHTDWRGYAILPFATEYRENRVALNANSLADNVELDETV
VTVIPTHGAIARATFNAQIGGKVLMTLKYGNKSVPFGAIVTHGENKNGSIVAENGQVYLT
GLPQSGKLQVSWGNDKNSNCIVDFKLPVVSPGTLLNQQTAICR
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgacagcctttcgtgccgcatttaaggcatatcgtatgcatcaggtgttaatactgcct
cgctttgcacggcttacctttgcccttggcttagcaactgcggtttttcccgttgacgca
gagtattattttaatccacggtttttaagcaatgaccttgctgaatctgtcgatttatct
gcctttactaagggacgcgaggccccacctggtacatatcgggtcgacatttatttgaac
gacgaatttatggctagtcgggatattacttttattgcagatgataataacgcagatctc
atcccatgcctgagtacagaccttcttgtcagtcttggcataaaaaaatcagcattatta
gacaacaaggaacattcggcagaaaaacatgtgccggacaacagcgcatgcacaccactt
caggatcgtttggctgacgcatcatctgagtttaatgttggtcagcaacatctatcactc
tccgttccgcaaatttatgttggcagaatggctcgcggctatgtttctccggatctgtgg
gaagaaggaataaatgctgggctactaaactatagttttaatagtaattctattaataat
cgtagtaaccataatgcaggaaaatccaactatgcatatttgaatttacagagtggcatc
aacattggtagttggcgactgcgcgataactcaacgtggagttataacagtgggagtagc
aattcatctgacagcaataaatggcagcatatcaatacgtcggctgaacgtgacattatt
cccttacgctcacgcttaacggtaggtgatagttataccgatggcgatatttttgatagt
gtgaactttcgtggcctcaaaataaattcaacagaagcgatgttgcccgatagccaacat
ggtttcgctccggtgattcatggtattgctcgtggcaccgcacaagtgagtgtaaaacag
aatggatacgatgtttatcagactactgtcccacccggcccttttactattgatgatatc
aactctgcggccaatggtggtgatctgcaagtaaccataaaagaggcagacggcagtatt
cagacattatatgttccttattcgtctgttccggttctccaacgtgctggatatacgcgt
tatgcgcttgccatgggggaatatcgtagtggaaataacctgcaaagctcccccaagttc
gtacaagcaagcttgatgcatggtctgaaaggaaactggacaccttatggcggaatgcaa
attgcagaagattatcaggccttcaaccttggtattggtaaagatttaggactttttggt
gccttttctttcgatatcacgcaggccaatacgacgcttgcagatgacacccgtcacagc
ggacaatcggttaaatccgtctacagcaaatccttctaccagacgggaaccaatatccag
gtcgcaggatatcgctattctacgcaaggtttttataacttatccgacagtgcatacagt
cgaatgagtggttacaccgtcaagcctcctaccggagacaccagtgagcagacactattt
attgattattttaatctgttctacagtaagcgtggtcaggaacaaataagcatctctcag
cagcttggaaattacggtacgacatttttcagtgccagtcgccaaagttactggaacacg
tcacgcagcgaccagcaaatatcatttggattaaatgtgccgtttggtgatattacgact
tcgctgaattacagctattccaataatatatggcaaaacgatcgggatcatttactcgct
tttacgcttaatgttccctttagtcattggatgcgtacagacagtcagtcggcatttcat
aattcaaacgccagttacagtatgtcaaacgatttgaaaggcggcatgaccaacctatca
ggggtttatggcactctgctaccggataataacctgaattatagtgttcaggtcggtaac
acccacgggggtaatacatcgtctggcaccagtggttacagttctcttaattatcgtgga
gcttacggtaatacgaatgtcggttacagtcggagtggtgacagcagccagatttattac
ggaatgagtggtggcattattgctcatgctgatggcatcacctttggacagccgctgggc
gacacaatggttctggttaaggctcctggcgctgataatgtcaaaatagagaaccagacc
ggtattcataccgactggcgtggctatgccatattaccatttgcgacagaatatagagaa
aatcgtgtcgctcttaacgcgaattcccttgcagataatgttgaactggatgaaaccgtg
gtcactgtcatcccaactcacggtgctattgccagagcaacatttaatgcacaaatcggc
gggaaagtattaatgacgttaaagtacggtaataaaagcgttccattcggtgcaattgtc
actcacggagagaataaaaatggcagcattgtcgcggaaaatggtcaggtttatctgact
ggacttccacagtcagggaaattacaggtttcatggggcaatgataaaaactcaaactgt
attgtcgatttcaagcttcctgtagtctctcctggaaccttgctgaaccagcagacagca
atctgtcgctaa
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