Escherichia coli LF82: LF82_2804
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Entry
LF82_2804 CDS
T00854
Symbol
ydcU
Name
(GenBank) Inner membrane ABC transporter permease protein ydcU
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
elf
Escherichia coli LF82
Pathway
elf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LF82_2804 (ydcU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
elf02000
]
LF82_2804 (ydcU)
Transporters [BR:
elf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LF82_2804 (ydcU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
CAP75930
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All DBs
Position
1476182..1477123
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AA seq
313 aa
AA seq
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MAMNVLQSPSRPGLGKVSGFFWRNPGLGLFLLLLGPLMWFGIVYFGSLLTLLWQGFYTFD
DFTMSVTPELTLANIRALFNPANYDIIVRTLTMAVAVTIASVILAFPMAWYMARYTSGKM
KAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLHHLGLEPLLTAFLTLPAVGGNTL
STSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQASADLGARPRQTFRYVVLPLAIPG
IAAGSIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQQGAIGNMPMAAAFTLVPIVLIALY
LAFVKRLGAFDAL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaacgtattgcaatcaccttcacgtccaggtctgggtaaggtgtccggtttc
ttctggcggaatccggggctggggctgtttttgctgctgcttggcccgctaatgtggttt
ggcattgtctatttcggctcgctgctaacgctgttatggcagggcttttatacctttgac
gatttcaccatgtcggtaacgccggaactgacgctggcgaacatccgtgcgctgtttaat
ccggcgaattacgacatcattgtccgcacgctgactatggctgtggcagtcactatcgcc
agcgtcattctggcttttccaatggcatggtatatggcgcgctataccagcggaaaaatg
aaagcgtttttttatatcgcggtaatgttgccgatgtgggcgagctacattgttaaagcc
tatgcctggacgttattgcttgcaaaagatggcgtagcgcagtggtttttacatcatctg
gggctggaaccactgctgactgcgttcctcacgctaccggcggtgggcggaaatacgctg
tcaacttccgggctggggcgttttctggtatttctctatatctggctgccgttcatgatc
ctgcccgtgcaggcggcgcttgaacgtttgccgccatcattgttgcaggcgtcggctgat
cttggtgcgcgtccacgacaaacctttcgctatgtggtgctgccgctggcgatcccgggt
attgccgctggctctatctttaccttctcactcacgctgggcgattttattgtcccgcag
ctggttggccctccaggatattttatcggcaatatggtttattcccagcagggggcgatt
ggcaatatgccgatggcggcggcattcaccctggtgccgattgttcttatcgcactgtac
ctggcgttcgtgaaacgtctgggagcgttcgatgcactctga
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