Escherichia coli LF82: LF82_3159
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Entry
LF82_3159 CDS
T00854
Symbol
ygdL
Name
(GenBank) Uncharacterized protein ygdL
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
elf
Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
elf03016
]
LF82_3159 (ygdL)
Transfer RNA biogenesis [BR:
elf03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LF82_3159 (ygdL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
DAO
UDPG_MGDP_dh_N
NAD_binding_7
3HCDH_N
ELFV_dehydrog
ApbA
TrkA_N
NT5C
Motif
Other DBs
NCBI-ProteinID:
CAP77245
LinkDB
All DBs
Position
complement(2923291..2924097)
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AA seq
268 aa
AA seq
DB search
MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLI
DMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMNA
GYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAK
LRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGA
ATMVTATFGFVAVSHALKKMMAKAARQG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtaattagtgatgcatggcgtcagcgttttggtggcacagcgcgtctgtat
ggtgaaaaagcattgcaactgtttgctgacgcgcatatttgtgtggttggtatcggtggt
gtcggttcctgggcggcggaagcgctagcgcgcacggggattggcgcaatcacgcttatc
gatatggatgatgtgtgcgtcaccaataccaatcggcaaattcacgctctgcgcgataac
gtcgggctggcaaaagcggaagtaatggcggagcgtattcgccagattaacccggagtgc
cgtgtaacagtagtggatgacttcgtgacgccggataacgtagcgcaatatatgaatgcc
ggttattcgtacgtgattgatgctattgatagtgtacggcccaaagcggcgctgattgct
tattgtcggcgcaataaaatcccgctggtcacgaccggtggcgctggtgggcagattgac
ccgacgcagattcaggttaccgatctggcgaaaacgattcaggacccgttggcggcgaag
ttgcgcgagcgcctgaaaagcgattttggcgtagtgaaaaacagtaaaggtaagctcggc
gtggattgcgtgttctctaccgaagcgctggtgtacccgcagtcagacggcaccgtctgt
gcgatgaaagccacggcggaagggccaaagcggatggattgtgcctcaggatttggcgcg
gcgacgatggtgaccgccacttttggctttgttgcggtttctcatgcgctgaagaagatg
atggcgaaagcggcgcgtcaggggtaa
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