Escherichia coli LF82: LF82_3220
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Entry
LF82_3220 CDS
T00854
Symbol
ygiS
Name
(GenBank) binding protein ygiS
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
elf
Escherichia coli LF82
Pathway
elf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LF82_3220 (ygiS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
elf02000
]
LF82_3220 (ygiS)
Transporters [BR:
elf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LF82_3220 (ygiS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
EAD9
Motif
Other DBs
NCBI-ProteinID:
CAP77488
LinkDB
All DBs
Position
complement(3207347..3208954)
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AA seq
535 aa
AA seq
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MYTRNLLWLVSLVSAAPLYAADVPANTQLAPQQVFRYNNHSDPGTLDPQKVEENTAAQIV
LDLFEGLVWMDGEGQVQPAQAERWEILDGGKRYIFHLRSGLQWSDGQPLTAEDFVLGWQR
AVDPKTASPFAGYLAQAHINNAAAIVAGKADVTSLGVKATDDRTLEVTLEQPVPWFTTML
AWPTLFPVPHHVIAKHGDSWSKPENMVYNGAFVLDKWVVNEKITARKNPKYRDAQHTVLQ
QVEYLALDNSVTGYNRYRAGEVDLTWVPAQQIPAIEKSLPGELRIIPRLNSEYYNFNLEK
PPFNDVRVRRALYLTVDRQLIAQKVLGLRTPATTLTPPEVKGFSATTFDELQKPMSERVA
MAKVLLKQAGYDASHPLRFELFYNKYDLHEKTAIALSSEWKKWLGAQVTLRTMEWKTYLD
ARRAGDFMLSRQSWDATYNDASSFLNTLKSDSEENVGHWKNAQYDALLNQAAQTADATKR
NALYQQAEVIINQQAPLIPIYYQPLIKLLKPYVGGFPLHNPQDYVYSKELYIKAH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgcgaaatttattatggctggtcagcctggtaagtgcggctcctctctacgct
gctgacgttcccgccaacacacagctcgccccgcaacaagtctttcgttacaacaatcat
agcgacccaggcacgctcgacccgcaaaaggtagaggagaatactgccgcgcagattgtg
ctggatctgtttgaaggtctggtatggatggacggtgaaggccaggtgcagcccgctcag
gctgaacgctgggagatacttgacggcggcaagcgctatattttccatctgcgtagcggt
ttgcagtggtcagacggtcagcctctgacggcagaggattttgtcctcggctggcagcgc
gcggttgacccgaaaacggcaagcccttttgctggctatctggcacaggcgcacattaac
aatgccgcggctattgttgcgggtaaagcagatgttacatcgctgggtgtcaaagcgacg
gatgatcgtactcttgaagttacgcttgagcagccagttccttggttcacgacgatgctc
gcctggccgacgctgttcccggttcctcatcatgtcatcgctaaacatggcgatagctgg
agtaagccagagaacatggtttacaacggtgcctttgtgcttgataaatgggtagttaac
gaaaagattactgcacgcaaaaatccaaagtaccgcgatgcgcaacatacagtattgcaa
caggttgagtatctggcgctggataattcggtcaccggctataaccgctatcgcgcggga
gaggtcgatctcacctgggttccggcgcagcaaattcccgccattgaaaaatcactgcct
ggcgagctacgaattatcccgcgtctgaacagcgaatattacaactttaaccttgagaaa
ccgccatttaacgatgtgcgggtgcgtcgggcgctatatcttacggttgatcgacagctt
attgcgcaaaaggtactggggttgagaacgcccgcaaccacgctgacgccgccagaggta
aaaggctttagcgcgacgacgttcgatgaactgcaaaagccaatgagtgagcgtgtcgcg
atggcaaaagtcttgctgaaacaggcgggatacgacgcctctcatccgctacgctttgag
ctgttctacaacaagtacgatctgcatgaaaagaccgcgatagcgttgtcttccgaatgg
aaaaaatggctgggtgcacaggtgacgctgcgcacaatggagtggaaaacctatcttgat
gcccgacgagccggtgattttatgctgtctcggcagtcgtgggatgcgacgtacaatgat
gcctccagcttcctgaacacgctcaaaagcgatagtgaagaaaacgtcggccactggaaa
aacgcgcagtatgacgccttactaaaccaggcggcacaaacggctgatgcaacaaagcgt
aatgcgctgtatcagcaggcagaagtgatcatcaaccagcaggcaccgctgattcccatc
tactatcagccgttaatcaaactgcttaaaccctacgttggcggttttccgctgcataat
ccccaggattatgtctacagcaaagagttgtatatcaaggcacattga
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