KEGG   Escherichia coli LF82: LF82_3220
Entry
LF82_3220         CDS       T00854                                 
Symbol
ygiS
Name
(GenBank) binding protein ygiS
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
elf  Escherichia coli LF82
Pathway
elf02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:elf00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LF82_3220 (ygiS)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:elf02000]
    LF82_3220 (ygiS)
Transporters [BR:elf02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    LF82_3220 (ygiS)
SSDB
Motif
Pfam: SBP_bac_5 EAD9
Other DBs
NCBI-ProteinID: CAP77488
LinkDB
Position
complement(3207347..3208954)
AA seq 535 aa
MYTRNLLWLVSLVSAAPLYAADVPANTQLAPQQVFRYNNHSDPGTLDPQKVEENTAAQIV
LDLFEGLVWMDGEGQVQPAQAERWEILDGGKRYIFHLRSGLQWSDGQPLTAEDFVLGWQR
AVDPKTASPFAGYLAQAHINNAAAIVAGKADVTSLGVKATDDRTLEVTLEQPVPWFTTML
AWPTLFPVPHHVIAKHGDSWSKPENMVYNGAFVLDKWVVNEKITARKNPKYRDAQHTVLQ
QVEYLALDNSVTGYNRYRAGEVDLTWVPAQQIPAIEKSLPGELRIIPRLNSEYYNFNLEK
PPFNDVRVRRALYLTVDRQLIAQKVLGLRTPATTLTPPEVKGFSATTFDELQKPMSERVA
MAKVLLKQAGYDASHPLRFELFYNKYDLHEKTAIALSSEWKKWLGAQVTLRTMEWKTYLD
ARRAGDFMLSRQSWDATYNDASSFLNTLKSDSEENVGHWKNAQYDALLNQAAQTADATKR
NALYQQAEVIINQQAPLIPIYYQPLIKLLKPYVGGFPLHNPQDYVYSKELYIKAH
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgtatacgcgaaatttattatggctggtcagcctggtaagtgcggctcctctctacgct
gctgacgttcccgccaacacacagctcgccccgcaacaagtctttcgttacaacaatcat
agcgacccaggcacgctcgacccgcaaaaggtagaggagaatactgccgcgcagattgtg
ctggatctgtttgaaggtctggtatggatggacggtgaaggccaggtgcagcccgctcag
gctgaacgctgggagatacttgacggcggcaagcgctatattttccatctgcgtagcggt
ttgcagtggtcagacggtcagcctctgacggcagaggattttgtcctcggctggcagcgc
gcggttgacccgaaaacggcaagcccttttgctggctatctggcacaggcgcacattaac
aatgccgcggctattgttgcgggtaaagcagatgttacatcgctgggtgtcaaagcgacg
gatgatcgtactcttgaagttacgcttgagcagccagttccttggttcacgacgatgctc
gcctggccgacgctgttcccggttcctcatcatgtcatcgctaaacatggcgatagctgg
agtaagccagagaacatggtttacaacggtgcctttgtgcttgataaatgggtagttaac
gaaaagattactgcacgcaaaaatccaaagtaccgcgatgcgcaacatacagtattgcaa
caggttgagtatctggcgctggataattcggtcaccggctataaccgctatcgcgcggga
gaggtcgatctcacctgggttccggcgcagcaaattcccgccattgaaaaatcactgcct
ggcgagctacgaattatcccgcgtctgaacagcgaatattacaactttaaccttgagaaa
ccgccatttaacgatgtgcgggtgcgtcgggcgctatatcttacggttgatcgacagctt
attgcgcaaaaggtactggggttgagaacgcccgcaaccacgctgacgccgccagaggta
aaaggctttagcgcgacgacgttcgatgaactgcaaaagccaatgagtgagcgtgtcgcg
atggcaaaagtcttgctgaaacaggcgggatacgacgcctctcatccgctacgctttgag
ctgttctacaacaagtacgatctgcatgaaaagaccgcgatagcgttgtcttccgaatgg
aaaaaatggctgggtgcacaggtgacgctgcgcacaatggagtggaaaacctatcttgat
gcccgacgagccggtgattttatgctgtctcggcagtcgtgggatgcgacgtacaatgat
gcctccagcttcctgaacacgctcaaaagcgatagtgaagaaaacgtcggccactggaaa
aacgcgcagtatgacgccttactaaaccaggcggcacaaacggctgatgcaacaaagcgt
aatgcgctgtatcagcaggcagaagtgatcatcaaccagcaggcaccgctgattcccatc
tactatcagccgttaatcaaactgcttaaaccctacgttggcggttttccgctgcataat
ccccaggattatgtctacagcaaagagttgtatatcaaggcacattga

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