Escherichia coli LF82: LF82_608
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Entry
LF82_608 CDS
T00854
Name
(GenBank) hypothetical transcriptional regulator yihW
KO
K27243
DeoR family transcriptional regulator, sulfoquinovose operon repressor
Organism
elf
Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elf03000
]
LF82_608
Transcription factors [BR:
elf03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
LF82_608
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HVO_A0114
MarR_2
GntR
HTH_Crp_2
HTH_20
MarR
HTH_29
HVO_A0261_N
HTH_24
Fe_dep_repress
HTH_27
HTH_5
DDRGK
Rrf2
HTH_17
MerR
HTH_23
HTH_AsnC-type
Xre-like-HTH
TrmB
RPA_C
WHD_RNase_R
Sigma70_r4
HTH_28
HTH_PafC
HTH_36
TnsD
TFIIE_alpha
HTH_Mga
SgrR_N
Mga
HTH_IclR
CggR_N
HTH_71
DUF1670
HTH_Tnp_ISL3
DnaD_N
HTH_38
PaaX
Ribosomal_L19e
YfeC-like
HemN_C
Motif
Other DBs
NCBI-ProteinID:
CAP78335
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Position
complement(4133844..4134632)
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AA seq
262 aa
AA seq
DB search
MSIIEVTGNPRHDQLVHLIAERGYMNIEELAQLLDVSTQTVRRDIRKLSEQGLITRHHGG
AGRVSSVMNTAFEQRELSLTAEKRAIAEAVADYLPERCTIFITIGTTVEAVARALLNRRD
LRIITNSLRVAQILYKNQDIEVMVPGGTLRAHNGGIIGPGAVDFIEGFRADYLITSIGAI
EHDGTLLEFDVNEALVARTMIKHARNTLLVADHTKFAASAAVSIGNARNVRAFFTDAPPP
NSFCQLLSEENVELVVAEQEVS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcatcgaagtgacaggtaatccacgccatgaccaactcgttcatctaatcgca
gaacgcggttatatgaatattgaagaactggcacaactgctggatgtttcaacgcaaacc
gtgcgccgggatatccgaaaactcagtgagcagggcttgatcacccgtcatcatggaggg
gccgggcgcgtctccagcgtcatgaataccgcttttgagcaacgggaactttcgctcacc
gccgagaaacgggcgatcgctgaggcggtcgccgattaccttcccgaacgctgtaccatc
tttatcaccatcggtacaaccgtagaagccgttgccagggcattactcaaccgtcgtgat
ttacgcattatcactaacagcctgcgtgtggcacagattctttataagaatcaggatatt
gaagtgatggtgccgggaggcactttacgcgctcataacggcgggattatcggcccagga
gccgtggattttattgaaggcttccgcgcagattatttaatcaccagtataggtgccatt
gagcatgacggcaccctgctggaatttgatgtcaatgaagcgttagtcgcgagaacgatg
attaaacatgcgaggaatacattgctagtggcagaccatactaagtttgccgcgtctgct
gctgtttcaattggcaatgcgcggaatgtcagggctttttttactgatgccccgcctccc
aattctttctgccagttgttaagtgaagagaatgttgaactggtggttgccgagcaagaa
gtatcctga
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