Enterobacter ludwigii EN-119: BH714_23190
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Entry
BH714_23190 CDS
T04719
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
elg
Enterobacter ludwigii EN-119
Pathway
elg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BH714_23190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elg03019
]
BH714_23190
03400 DNA repair and recombination proteins [BR:
elg03400
]
BH714_23190
Enzymes [BR:
elg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BH714_23190
Messenger RNA biogenesis [BR:
elg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BH714_23190
DNA repair and recombination proteins [BR:
elg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BH714_23190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AOT46229
UniProt:
A0AAX3L9Z0
LinkDB
All DBs
Position
pEN-119:59874..61703
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AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSSQTREQQQEVMAGCRTGQVRLLY
IAPERLMLDNFLDHLSHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMAL
TATADDTTRQDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQNRGFSAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEHWVSIIRQLIHLG
FATQNIAQHSALQLTEAARPVLRGDIELKLAVPRVVALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQTPLSASEMLSVNGVGTRKLERFGKEFMALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggaatcgctggctaaacaggttttgcatgaaacc
tttggctaccagcagttccgccctggccaggaaaccatcattgaaaccgtgctggaaggc
cgcgattgtctggtggtcatgcctaccggcggcggtaaatctctctgctatcaggtgccc
gcgctggtgctcaacggcctgacggtcgtggtatcgcctcttatttccctgatgaaagat
caggtcgatcagctccttgccaacggcgtggcggcggcctgtcttaactccagccagacc
cgcgagcagcagcaagaggtcatggccggttgccgtaccgggcaggttcgcctgctgtat
atcgcgccggaacgtctgatgctggataacttcctcgatcatctgtcgcactggaatccg
gtcctgctggcggtggatgaagcccactgtatctcccagtggggacatgatttccgcccg
gaatatgcggcgctcggccagctccgtcagcgttttcccgaactgccgtttatggcactc
accgcgacggcagatgacaccacgcgtcaggatatcgtccggctgctggggctgaacgat
ccgctgattcaggtcagcagcttcgaccgcccgaacatccgctacatgctgatggaaaaa
ttcaagccgctggatcagcttctgcgctacgtacaggagcagcgcgggaagtccggcatc
atctactgcaacagccgcgcgaaggtggaagacacggccgcgcgcctgcagaaccgtggt
tttagcgccgccgcctaccatgccgggctggaaaacgcggttcgcgccgatgtgcaggag
aaattccagcgcgatgacctgcagattgtggtggcgacggtggcgttcggaatggggatc
aacaagccgaacgtgcgcttcgtcgtacacttcgacattccgcgcaatatcgaatcgtac
taccaggaaactggccgcgccgggcgtgatgggctgcctgcagaagccatgctgttttac
gatccggccgacatggcgtggctgcgccgttgtctggaagagaaaccgcagggccaactg
caggatatcgaacgccacaagctcaacgcgatgggcgcgtttgccgaagcgcaaacctgc
cgccgtctggtgctgctcaactactttggcgaggggcgtcaggagccgtgcggcaactgc
gatatctgtcttgacccaccaaagcaatacgatggcctgatggatgcgcgcaaagcgctc
tcgaccatctatcgtgtgaaccagcgcttcggcatgggctacgtggtggaagtgttgcgt
ggggcgaataaccagcgtatccgcgacatgggacacgataagctgcccgtctacggtatc
ggcaaagaccagagccacgagcactgggtgagcatcatccgtcagctgattcacctgggc
tttgccacgcaaaacattgcccaacactccgcgcttcagcttaccgaagcagcacgtccg
gtgctgcgcggggatatcgaactgaagctcgcggttccgcgcgttgtcgccctgaagccg
cgggtgatgcaaaaatcgtacggcggcaattacgaccgcaagctgtttgccaaactgcgc
aagctgcgtaaagccattgctgatgaagagaacattccgccctatgtggtcttcaacgat
gcgacacttatcgagatggcagagcagacgccgctcagcgccagcgaaatgctcagcgtc
aacggtgttggtacgcgcaagctggagcgctttggcaaagagtttatggcgcttattcgc
gctcatgtcgacggtgacgatgaggagtag
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