Candidatus Electrothrix sp. GW3-4: WGN25_03430
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Entry
WGN25_03430 CDS
T11264
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
elgw Candidatus Electrothrix sp. GW3-4
Brite
KEGG Orthology (KO) [BR:
elgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elgw03032
]
WGN25_03430 (gyrB)
03400 DNA repair and recombination proteins [BR:
elgw03400
]
WGN25_03430 (gyrB)
Enzymes [BR:
elgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
WGN25_03430 (gyrB)
DNA replication proteins [BR:
elgw03032
]
Prokaryotic type
DNA Topoisomerases
WGN25_03430 (gyrB)
DNA repair and recombination proteins [BR:
elgw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
WGN25_03430 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
PEPcase_2
DUF4853
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WYD84996
LinkDB
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Position
729859..732270
Genome browser
AA seq
803 aa
AA seq
DB search
MSEQEKTSYGAEQIKVLDGLEAVRKRPAMYIGNTAEEGLHHLIYEVVDNSIDEALAGHCD
RIRVVIREDGGVSVEDNGRGIPVEKHPTEDMTALELVMTTLHAGGKFDHSSYKVSGGLHG
VGVSVVNALSTAVTAEIKRNGKVYRQSYEYGDKTSDMEIIGTSDHTGTTITFKPDPSIFR
ETTIFKYDTVRNRLRELAFLNRGIRISLKDERSGAEDEFHFEGGIVEYVEYLNRKRTSIH
PDPIFIEGEKDQVQVEISLQYFDGYSERLSSFVNNINTREGGSHVAGFRAALTKCINKYA
TDDIVPKKMKAKMGGDDVREGLTAIVSVRVPNPQFEGQTKTKLGNAEVKSIVSTICHEKL
SAYLEENPQIAKLILSKAVDAARAREAAKRARDLSRKKGGTSVMMAGKLAECQSKKPEER
ELFIVEGDSAGGSAKQGRDRSVQAILPLRGKIMNVEKARFDKILDSEEIKQLIASLGTGI
GREEFDQEKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQMLPLVENGYVYIGQPPLYRLG
RGKKEQYFIDDDALNNYLYDQAAQFIRVRREDGAEIEGQAMVNMLKKLTFFGRVNSFLER
MNIQERLAFFLLENDVHSADQFQDKAFLEGLLEKLATLDSVASNIRVCRWRPSCYEVDVS
FRGQAHTRTTMGPNIPLIPEYRHALDLYPEIRDYASGTFTIIKTSSSGQEKEFLAEDWHG
LIRLVREETFKGSHLQRYKGLGEMNPEQLWDTTMNPENRTLLQVKIEDAEAADDLFVTLM
GDKVEPRREFIQNHALEVAELDV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagcaggaaaagacgtcctacggggcggaacagataaaggtccttgacgggctg
gaggccgtgcgcaagcgtccggctatgtacatcggcaatactgccgaagaaggactgcac
catctgatttacgaggtggtggataactccattgatgaggccttggcgggccattgtgat
cggatccgggtggtgatccgtgaggatggcggtgtctcggttgaggataacggacgtggt
attccggtggagaagcatccgacggaagacatgactgccttggaactggttatgacgacc
ctgcacgccggaggtaagttcgatcactcttcctacaaggtatctggtgggctgcatggg
gttggtgtttcggtggttaacgccctgagcacggcagtcactgccgagatcaaacggaac
ggaaaggtctaccgtcagtcctatgagtacggcgataaaaccagtgatatggagatcatc
gggaccagcgatcataccggaacaactatcacctttaagccggacccctcaatcttcagg
gaaactaccatctttaagtacgatacggtgcgtaaccggctgcgtgagcttgccttcctc
aatcgaggcatcaggatttctcttaaggatgagcgcagcggggcggaagacgagttccat
tttgaaggcgggattgttgagtatgtggaatacctgaaccgtaaacgtacttcgattcat
cctgaccctatttttattgaaggggaaaaggatcaggtgcaggtggagatctccctccag
tattttgatggctattctgagcgcctatcctcctttgttaataatatcaatacccgtgag
ggtgggtctcatgtagctggttttcgggctgcattgaccaaatgtatcaataaatacgcc
acagatgatattgttccgaaaaaaatgaaggccaagatgggcggtgatgatgtccgtgaa
ggcctgactgctattgtctcggttcgggtgcctaacccccagtttgagggacagaccaag
accaagttgggaaatgctgaggttaaatccattgtctctaccatctgtcatgagaaactc
agcgcctatttggaagagaatccccagattgccaagttgattctgagcaaggccgttgat
gcggcccgggccagagaggcggcaaaaagggctcgggatctgtcccgtaaaaagggtggc
acctcggtgatgatggcgggcaaactggctgagtgccagtccaagaagccggaagagcgg
gagttgtttatcgtggagggtgattctgcgggtggttctgcaaaacaaggcagagatcgt
tctgtccaggctattctgcccctgcgcggtaagattatgaacgtggaaaaggctcgtttt
gataagatccttgattccgaggagatcaaacagctgatcgcttccttagggaccggtatt
ggtcgggaagagtttgaccaggagaaactccgctaccataaaatcatcattatgacggat
gctgatgtggatggagcgcatatcaggaccttgctccttacttttttctaccgccagatg
ttacccttggtggaaaacggttatgtctatatcggtcagccacccttgtaccggttagga
cgggggaaaaaggaacagtattttattgatgacgatgccctgaataactacctttatgac
caggccgctcaattcatccgggttcgtcgggaggacggtgcagagattgaggggcaggct
atggtcaacatgctcaagaagttgactttttttggacgggttaacagctttctggaacgg
atgaatattcaggaaaggttggccttctttcttctggaaaacgacgtgcattccgcagat
cagttccaagataaggccttcctggaaggattgctggaaaaactggctaccttggattcg
gttgccagcaatatccgcgtttgccgctggcgcccgagctgttacgaggtagatgtttcc
tttcgtggtcaagctcatacccggactactatgggacccaatattccgctcatcccggaa
tatcggcacgccctcgacctgtaccctgaaattcgagactatgcctccggtacttttacg
attatcaagacctcgagttcagggcaggaaaaggaatttttggcagaggactggcatgga
ttgattcgcttggtgcgtgaggaaacttttaagggcagtcatctgcaacgctataaaggt
cttggtgaaatgaatccggaacagctgtgggataccaccatgaatccggaaaatcgcacg
ctccttcaggtaaagattgaggatgctgaggcagctgatgatctttttgttaccctgatg
ggggataaggtcgagccgagacgtgagtttatccagaaccatgcgttagaagttgccgag
ctggatgtgtga
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