Candidatus Electrothrix sp. GW3-4: WGN25_05310
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Entry
WGN25_05310 CDS
T11264
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
elgw Candidatus Electrothrix sp. GW3-4
Pathway
elgw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
elgw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WGN25_05310 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elgw03400
]
WGN25_05310 (uvrB)
DNA repair and recombination proteins [BR:
elgw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WGN25_05310 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WGN25_05310 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_22
SWI2_SNF2
nSTAND_NTPase5
DUF87
Microtub_bd
AAA_5
DUF7553
Motif
Other DBs
NCBI-ProteinID:
WYD85353
LinkDB
All DBs
Position
1130249..1132276
Genome browser
AA seq
675 aa
AA seq
DB search
MSSTPFQLISPFTPSGDQPAAIDKIVQGLNDGAQHQVLLGVTGSGKTFTMAQVIAKVNRP
ALVMAPNKTLAAQLFAEFKDLFPHNAVEYFVSYYDYYQPEAYIPASDTYIEKDSAINDAI
DKMRHSSTRALLTRDDVLIVASVSCIYGLGSPDEYKNMHLFLQRDEDYPMEEVQRRLVFM
LYERNEMSFHRGTFRVRGDVIDIFPVYEEDRAVRVEFFGDTIDAISIIDPLRGVVLENVD
ELTLFPSSHFVTGQENLQRAMHTIKDELRERLDELYAENRLVEAQRLEQRTQFDLEMITE
LGYCNGIENYSRHLTGKPPGAPPPNLLDYFPDNYITIIDESHIGVPQIGGMFNGDRARKT
TLVNFGFRLPSALDNRPLRFDEFEQRVHQTVYVSATPGPYEMEKCEGRIVEQLIRPTGLL
DPRIEVRPAGTQVDDLLEEIRRCTERGESVLVTTLTKRMAEDLTEYYGKVGVKVRYLHSD
IKTLERIELIRDLRRGEYNVLVGINLLREGLDIPEVALVAILDADKEGFLRSERSLVQTC
GRAARNADGTVILYADKITKSMQYTIDETNRRRKIQEEFNQEHGIVPQTIISEIKDSMSE
HLRASGWVPEDAADDAGVLKAAEPEMVYRSAADLHKDIKQLEKQMQEAADNLAFEEAAAL
RDQIKDLKMLELELG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctactccattccaactcatctcccccttcactccctcaggcgaccagccggca
gcgattgataaaatcgtccaaggcctgaatgacggagcacagcatcaggtgctgctcggc
gtgaccggctcaggcaagacctttaccatggcccaggttatcgccaaggtcaatcgaccc
gccttggtcatggccccgaacaaaactctggcagcccagctctttgccgagttcaaggat
ctctttccccataacgcggtggagtattttgtttcgtattacgattattaccagcccgag
gcctatattccggcctcggatacctatattgaaaaagattcggccatcaacgatgccatc
gacaagatgcgccattcctccacccgggccctgctcacccgcgatgacgtgctcatcgtg
gcctcagtctcctgcatttatggacttggttcgccggacgagtacaagaacatgcatctc
tttcttcagcgggacgaggattatccgatggaggaggtccagcgacgcctggtctttatg
ctctacgagcgcaacgaaatgtcttttcaccggggtaccttccgggtgcgcggcgatgtg
attgacatcttcccggtctatgaggaagaccgtgcggtgcgggtggagttctttggtgat
accattgacgcgatctccatcattgatcccctgcgcggggtggtattggagaatgtggac
gagctgaccctgtttccctccagccactttgtcacgggccaggaaaacctgcaacgggcc
atgcatactattaaggatgagctgcgtgaacgtctggatgaactctacgcagaaaaccgt
ttggtcgaggcccaacgcctggagcaacgcacccagtttgatctggagatgattactgaa
ctgggctattgtaacggcattgagaactacagtcgccatctcaccggtaaaccgcctggt
gcgccgccgcccaacttactcgactatttcccggataactatatcaccatcattgatgag
tcccatatcggggtgccccagatcggcgggatgttcaacggggatcgggcgagaaagact
accttggtcaacttcggctttcgcctgccctcggccctggacaaccgccctttgcgcttt
gatgaatttgagcagcgggtccatcagaccgtctatgtctcggccacgcctggaccctat
gagatggaaaaatgtgagggccgaatcgtggagcagctcattcgtccgacaggcctgctt
gatccccggattgaggtgcggccagcaggtacccaggtggatgatctgttggaggagatc
aggcgttgcacggaacgaggcgagtccgttctggtcacgaccctgaccaaacgcatggct
gaggatctgaccgagtattatggcaaggtcggtgttaaggtccgctatctccattcggac
atcaagaccctggaacggatcgaattgatccgggatctgcgtcggggcgagtacaacgta
ttggtgggtatcaacctgctgcgcgaggggctggatatcccggaggtggccttggtggcg
atcctggatgcggataaagaaggcttcctgcgttccgagcggtccctggtccagacttgc
ggccgggcagcccgtaatgccgacggcacggtgattctctatgccgataaaatcaccaaa
tccatgcagtacaccattgacgagaccaaccgccgtcggaaaatccaggaggaatttaat
caagaacatggtattgtcccgcagacgataatctctgagatcaaggactctatgagcgaa
catctccgggcctcaggctgggttcccgaagacgctgccgatgatgccggggtgctcaag
gcggcagagccggaaatggtgtatcgttctgctgctgacctgcataaagatattaagcag
ctggagaagcagatgcaggaagcggcagataatctggcctttgaggaggccgccgccctg
cgggatcagattaaggacctgaagatgttggagttggaacttggctga
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integrated database retrieval system
