Candidatus Electrothrix sp. GW3-4: WGN25_05455
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Entry
WGN25_05455 CDS
T11264
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
elgw Candidatus Electrothrix sp. GW3-4
Pathway
elgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WGN25_05455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elgw03019
]
WGN25_05455
Enzymes [BR:
elgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WGN25_05455
Messenger RNA biogenesis [BR:
elgw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WGN25_05455
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Utp25_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WYD85382
LinkDB
All DBs
Position
1163121..1164668
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AA seq
515 aa
AA seq
DB search
MIKRFLIKAGRKLKRLTRSGERKKKITSPSDQELVQATGQQHRSSDKRTHSPYAEQQGDS
ERREQDRPPRKPRKKKPRWTLEQFPVDPVEGQSRFHDFSLPLGLMHAIADLDFKYCTPIQ
EKALPDAMAGKDIIARAGTGTGKSAVFLVAVFARLISENKRQRQSGEKYPGRKPGAPRAL
IIAPTRELVMQIAKDGKALANYSPLRIVAVYGGTDYQKQEQVLRERPVDVLVATPGRLLD
YVSKKIVDLRQAGIMVIDEADRMLDMGFIPDVRRIIYKTPPKEQRQTMLFSATLTEDVKH
LASQWCVKPISIESAPEQVAVDTVQQLVYTVTSEEKYHVLYNLITGQEHARIMVFTNMKS
EAARLNDRLRRNGINAILLTGDVPQKKRMTRLESFRASENGVMIATDVAGRGIHIDGISH
VVNYTLPYEPEDYVHRIGRTGRAGESGIAICFACEEGAFQLPDIEEYIGRSLACTLPEEE
LLVKPPKGSKKGGNEKVPHRNSGSSGGRRPRPRRR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacgattccttattaaggccggacgcaaattgaaacggctgaccagatcaggt
gagagaaagaagaagataacttctccgtccgatcaagaactggtgcaggcaacagggcag
cagcacagatcttccgataaaaggacccattctccatatgcggaacagcaaggagactca
gaaaggcgggagcaggaccgtcctcctcgtaagccgagaaagaaaaagcctcgctggacc
ctggagcaatttccggtggatcctgtggaaggccaaagtcgttttcatgatttctccctg
ccgctgggcctgatgcatgctattgctgatcttgatttcaaatattgtaccccgattcag
gaaaaggccttaccggatgccatggctggtaaagatatcatcgccagggctgggaccggg
actggcaagagcgcagtctttctggttgcggtctttgcccgcctgatcagcgagaataag
cggcaacggcaatcaggggaaaaataccctgggcggaagcctggggctccccgtgccctg
attattgctccaaccagagaattggttatgcagatcgccaaggacggtaaggccttggcc
aactattcgcccctgcgcattgtcgcggtttacgggggcacggattaccagaagcaggag
caggtcctgagagaacgtcctgttgatgtcctggtagccaccccagggcgtctgttggat
tatgtctcgaaaaagattgttgatctgcggcaggccggaattatggtcattgatgaggcg
gacaggatgttggacatgggttttattcccgatgtccgacggatcatctataaaaccccg
cccaaggagcaacgccagaccatgctcttctccgctaccctgaccgaggatgtcaaacat
cttgcctcgcaatggtgcgtaaaacccatatcgattgagagcgctcctgaacaggtggcc
gtggacacggtgcagcagctggtctacaccgtgaccagtgaggagaaataccatgtgctc
tataacctgatcacaggccaggaacatgcgcggatcatggtctttaccaatatgaaaagc
gaggctgcccgcctgaatgatcggttgcggcggaacgggatcaatgctattctactcacc
ggagatgttccccaaaaaaaacggatgacccgcctagaaagctttcgagccagcgagaac
ggtgtgatgattgccacagatgtggccgggcgtggaatccatatcgacgggatcagtcat
gtggtgaattataccctgccctatgaaccggaagattatgtccaccggattggcaggacg
ggcagggcaggggaaagcggtattgccatctgttttgcctgtgaagaaggggcatttcag
ctacctgatattgaagagtacatcgggaggtcactggcctgtaccctgccagaggaagag
ctcttggtaaagcctcccaaggggagcaagaaaggcgggaatgaaaaggtcccccatcga
aatagcgggagtagtggtgggagaaggcctcggccaagaaggcggtaa
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