Candidatus Electrothrix sp. GW3-4: WGN25_05970
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Entry
WGN25_05970 CDS
T11264
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
elgw Candidatus Electrothrix sp. GW3-4
Pathway
elgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WGN25_05970 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elgw03019
]
WGN25_05970 (pnp)
03016 Transfer RNA biogenesis [BR:
elgw03016
]
WGN25_05970 (pnp)
Enzymes [BR:
elgw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
WGN25_05970 (pnp)
Messenger RNA biogenesis [BR:
elgw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WGN25_05970 (pnp)
Transfer RNA biogenesis [BR:
elgw03016
]
Prokaryotic type
tRNA degradation factors
WGN25_05970 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WYD85482
LinkDB
All DBs
Position
1283533..1285620
Genome browser
AA seq
695 aa
AA seq
DB search
MYTKKEVEIGGRTLSFETGKMAKQTSGSVVVTCGDTMVLVTVVAEKGIKDVGFLPLTIEY
QERMYAAGRIPGNYFRREIGRPSEKEILTCRLIDRPLRPLFPKGYMSETQLIATVFSADQ
EIDPDILAMNGASAALILSDVPWAGPVASARVAYINDEYVLNPTVSQLEKSAMNLVVAGT
ESAVVMVEGRTGELSEDVVLEAIFFAHQEIQPIIAMQKALQEEVGKAKREVTPPVVNESL
KAKVEELAAVGMEEVVTLAGKIERGARYDQLKDEVLAALDEELYESEGEVFSLLGAYKKS
IMRDRIVNKGLRLDGRSFDQVRPIECEVGVLPKAHGSALFTRGETQAMVIGTLGSERDEL
HVEGLTGDNYRRFMMHYNFPPFCVGEARMMRGPSRRDIGHGTLARRGIETVLPDAADFPY
TMRVASEILESNGSSSMATVCGASLALMDAGVPIKAPVSGVAMGLIKEGDKVVVLTDILG
DEDHLGDMDFKVVGTAEGISSLQMDIKIDGVDREIMASALAQAKAGRLHILSKMEEAIGI
PRKSVADHAPKYVTIKINQDKIRDIIGPGGKVIREMTTEFDSKIDVDDDGTIKIFSKSTE
SAEALVAHIEGMTAMPEIGKVYNGLVKTIKDFGAFVEILPGTDGMVHISELADRRVNKVT
DVLEEGEQVKVKVIDIDGRGRIRLSRKAALEEGEE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtatacaaagaaagaagtcgagatcggtggacgcactctgtcctttgagaccggcaag
atggcaaaacagaccagtggttccgttgtggtgacttgcggcgataccatggttcttgtc
acagtggttgcggagaaaggtataaaagatgttggtttcctgccgttaaccattgaatac
caggagcgcatgtatgctgccggacgtattccgggcaattattttcgtcgggagatcggt
cgtccttcggaaaaggaaatactgacctgccgacttattgatcgtcctttgcgtccgctt
tttcccaaagggtatatgtctgaaacccagctgattgccacggtcttttcagcggatcag
gagatcgacccggatatcctggccatgaacggtgcctctgcggccttgatcctttctgat
gtcccctgggcagggcctgtggcttcagccagagtcgcctacatcaatgatgaatatgtc
ctgaatcccactgtcagccagctggagaaatccgccatgaatttggtagttgccgggacc
gagtcagctgtggttatggtggaaggtcgtactggcgagctcagtgaggacgtggtcctt
gaggcgatctttttcgcacaccaggaaattcagccgattattgctatgcagaaggccttg
caggaagaggtaggaaaggcgaaacgtgaagttacacctcctgtagtcaacgagtccctg
aaagccaaggtggaagagcttgccgctgttggtatggaagaggtcgttactcttgctggt
aagattgagcgcggtgctcgctatgaccagctgaaggacgaggtgctggctgcgcttgat
gaggaactgtacgagagcgaaggtgaagtctttagcctcctgggtgcatacaagaaaagt
attatgcgtgaccggattgtgaacaagggcttgcgtctggacggacgcagctttgatcag
gtccgccccatagaatgtgaagttggtgtcttgcctaaggcccacggatctgcgctgttc
acccgaggggagacccaggcgatggtcattggtacgctgggttctgagcgcgatgaactg
catgtggaaggcctgactggcgataattaccgccgctttatgatgcattataatttcccg
cctttctgcgtgggcgaggctcgtatgatgcgtggtcccagtcgtcgtgatattggacat
ggtaccttggcccggcgtggtattgaaactgtcctgcctgatgcagcagattttccctac
accatgcgggtggcctctgagatcctggagtccaacggttcttcttctatggccacggtc
tgcggggcaagccttgccctgatggatgctggcgtgcctattaaggccccggtctccggt
gttgctatgggcctgattaaagagggcgataaggtggttgtgctcaccgatatccttggt
gatgaggatcatcttggtgatatggacttcaaggttgtgggtacggctgaggggatttct
tcgctccagatggatatcaagattgacggggttgatcgcgagattatggccagtgccttg
gctcaggccaaagcaggccgtctccatattctgagtaagatggaagaggccatcggtatt
ccgcgcaagagcgttgctgatcatgcgccgaaatatgtcaccataaagatcaatcaggat
aagattcgtgatatcatcggcccgggtggtaaagtgattcgggagatgaccacagagttt
gattccaagattgatgtggacgatgatggcactattaagattttctccaagagcacggaa
tcagctgaggccttggttgcccatattgaaggcatgacggctatgccggagatcggcaag
gtctataacggtcttgtcaagaccattaaggatttcggcgcctttgtggagattttgcca
ggtactgacggaatggttcatatctccgagctggctgaccggcgcgtcaataaggtcact
gatgttcttgaagaaggcgagcaggtcaaggttaaggtgattgatattgacggacgtgga
cgtattcgcttgagccggaaggctgccctggaagaaggggaagagtag
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