Candidatus Electrothrix sp. GW3-4: WGN25_06665
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Entry
WGN25_06665 CDS
T11264
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
elgw Candidatus Electrothrix sp. GW3-4
Pathway
elgw00521
Streptomycin biosynthesis
elgw00523
Polyketide sugar unit biosynthesis
elgw00541
Biosynthesis of various nucleotide sugars
elgw01100
Metabolic pathways
elgw01110
Biosynthesis of secondary metabolites
elgw01250
Biosynthesis of nucleotide sugars
Module
elgw_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
elgw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
WGN25_06665 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
WGN25_06665 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
WGN25_06665 (rfbC)
Enzymes [BR:
elgw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
WGN25_06665 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WYD85620
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Position
complement(1461674..1462216)
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AA seq
180 aa
AA seq
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MKVRTTSLPDVLIIEPRVFGDDRGFFFESFNQRRWQEATGLKTTFVQHNHSSSRKNVLRG
LHYQIQQPQGKLVRVIAGEVFDVAVDLRKNSPTLGQWTGEYLSADNKKQFWVPEGFAHGF
LVLSEKAEFFYLATDYYAPESERAIIWNDPDLNIDWPLQGEPCLSEKDCAASSFQDADLY
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtacgaacaacatctcttccagatgtccttattattgaacccagggtctttggt
gacgaccggggcttttttttcgagagtttcaatcaacgccgctggcaggaggcgaccggc
ctgaagaccacctttgttcagcataatcactcttcgtctcgcaaaaatgttctgcgaggc
ctccattaccaaattcagcagccgcaagggaaactcgtgcgggttattgcgggcgaggtt
tttgacgttgctgtggatctgcgtaaaaactcacccaccttagggcaatggacgggcgaa
tatctgtccgctgataacaaaaagcaattctgggtgccagaaggctttgcccacggcttc
cttgtcctttctgaaaaagctgagtttttctatttagcgacagattattatgcaccggag
tctgagcgggctattatatggaatgatcccgacttaaacatcgattggcctctccaaggc
gagccctgcctctctgaaaaagactgtgctgcaagctcattccaggatgcagatctgtat
taa
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