Candidatus Electrothrix sp. GW3-4: WGN25_14210
Help
Entry
WGN25_14210 CDS
T11264
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
elgw Candidatus Electrothrix sp. GW3-4
Pathway
elgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WGN25_14210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elgw03019
]
WGN25_14210
03009 Ribosome biogenesis [BR:
elgw03009
]
WGN25_14210
Enzymes [BR:
elgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WGN25_14210
Messenger RNA biogenesis [BR:
elgw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WGN25_14210
Ribosome biogenesis [BR:
elgw03009
]
Prokaryotic type
rRNA helicases
WGN25_14210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
RecG_N
Ribosomal_L4
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WYD83111
LinkDB
All DBs
Position
complement(3198531..3200243)
Genome browser
AA seq
570 aa
AA seq
DB search
MITFTDIGINDEILQAVSAQGFTEPTPVQAKVIPLMLEQEVDIVSLAQTGTGKTAAFGLP
LVQLIDPKEKRTQGLVLCPTRELCMQVSRDLENFSRFIKGLRVLAIYGGASIEQQMRELR
KGVQIIVATPGRLRDLIKRGKVDISAVRYAVFDEADEMLQMGFQDELNAILAETPEDKNT
LLFSATMSREVANIASRYMSNPVEITMGRKNSGAENVTHEYYLINGRDRYPALKRIVDNN
PDNYSIIFCRTRRDTQEVADKLIQDGYRADSLHGELSQAQRDLVMDKFRKKHLQLLVATD
VAARGLDVNDLTHVINYSLPDDIAAYTHRSGRTGRAGSSGTSIALVDMRERHRIKHIENK
INKKFEKATIPTGKEVCTTQLRSLMEVISTTEVEHDQIDPLYAEIEQQLEHLSREELIKK
FVSLEFNRFLQYYKDAPDLNQQVSGKDRRNGFQKDTGRNQNGKAFTRFHLNVGRRNGVLP
ENLISMINAAPGGGRIKVGKIEIMRNTATIEGDSRFIPQILGAFQHFQVNGKPVTAKVLQ
APSGGRGRRDSSNSSMGKSRKPWKGRRPRS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgatcacatttacagacatcggcatcaatgacgaaatccttcaggctgtttccgcacag
ggctttacagaaccaaccccggtgcaggccaaggttatcccgctgatgctggagcaggag
gtcgatatcgtcagcctcgcccaaaccggaaccggcaagaccgcagcttttggcttgccg
ttggtccagctgattgacccaaaggagaaacgaactcaaggcctggttctctgcccaacc
cgggaactctgcatgcaggtatcaagggatctggaaaatttttctcgtttcattaaaggg
ctccgagttttggcgatctatgggggggccagcattgaacaacagatgcgcgaactccgt
aaaggtgtgcagattatcgttgccaccccagggcgcctgcgagacctgattaaacggggc
aaagtggatatctccgctgtccgctatgcagtctttgacgaggccgatgaaatgttgcaa
atgggttttcaggatgagctcaacgccattctggcagagaccccggaagataaaaatacc
ctgttgttctccgccaccatgtccagggaggttgccaatatcgccagccgatatatgtcc
aatcctgtggagatcaccatgggccggaagaactccggggctgaaaatgtaacccatgag
tattacctgatcaacggtagagaccgttatcctgccctcaaacggatcgtggataataac
ccggataactactccattattttttgtcgcaccagaagggatacccaggaagtggcagac
aagctgattcaggacggctaccgggccgattccctgcatggtgaattaagccaggcccag
cgcgatctggtcatggataaattccgtaaaaaacacctgcaacttctggtagccactgat
gttgctgcccgaggcctggatgtcaatgacctgacccatgttatcaactacagcttgccc
gatgatattgccgcctatacccatcgcagcggccggaccggacgagctggaagtagcggt
acctctattgccctggttgatatgcgggagcgccatcggattaaacatattgaaaacaag
atcaataagaaatttgaaaaggcaacgattcctacgggcaaagaggtctgtaccacccag
ctccgcagcctgatggaggttatcagcacaaccgaggtggagcatgaccagattgatcct
ctttatgcggagattgagcaacagcttgagcatctgagcagggaagagctgattaaaaaa
tttgtctccttggagttcaaccggttcctccaatattataaagatgcacctgatcttaat
cagcaggtcagcggcaaagaccgaagaaacggtttccaaaaggacacaggaagaaatcaa
aatggaaaggcctttacccgctttcatctcaatgtgggacggcgtaatggtgttctcccg
gaaaacctgatcagtatgattaatgccgctcctggcggtggtcgcatcaaggtgggcaag
atagagataatgcgtaacaccgcaaccattgagggagacagtcgctttattccccagata
ctgggcgcctttcagcattttcaggtcaacggaaagcctgttacagcgaaggtccttcag
gcccccagcggtggcagaggacgacgcgatagcagtaatagcagtatgggcaaatcacgt
aaaccttggaagggcaggagaccgagaagttaa
DBGET
integrated database retrieval system
