Candidatus Electrothrix sp. GW3-4: WGN25_16545
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Entry
WGN25_16545 CDS
T11264
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
elgw Candidatus Electrothrix sp. GW3-4
Brite
KEGG Orthology (KO) [BR:
elgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elgw03009
]
WGN25_16545 (rimO)
Enzymes [BR:
elgw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
WGN25_16545 (rimO)
Ribosome biogenesis [BR:
elgw03009
]
Prokaryotic type
ribosomal protein modification factors
WGN25_16545 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
WYD83561
LinkDB
All DBs
Position
complement(3737868..3739208)
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AA seq
446 aa
AA seq
DB search
MTIQKKMHLTSLGCAKNLVDSEMMLGSLELEGYTTVEDPAEAELLLINTCGFIRPAVEEA
VDEILRLAEYKQDDPTKKLVVTGCMVQRYGKDLQEELPEVDFFVGIDEELEIASLVKGWS
PGSPSLFLKGPSSFLADSGVLRRLATPFFRSYLKITEGCDNRCTYCMIPMIRGDLRSRSV
QDLIIEAKALEQGGVKELSLIAQDLTAYGDDLKAGENLVSLLEQLLAETEIPWFRLLYLY
PSSVSVELLELMAEHPRILPYLDIPFQHVSGPVLQRMGRRYGQQELEQLITTIRRILPDC
ALRTTMMVGFPGETEDDIEKLIDCLQRWRLDHVGVFPYEAEQGSIAADLPEKVERKVREE
RFAQVMEVQAEVSAQRLEQYVGRKEVVLVEGVSQETDLLLEGRTRYQAPDIDGCVFINDG
IANPGDIVTVEITEAHTYDLVGGITR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacaattcagaagaaaatgcacctgacaagcctcggttgcgcgaagaatctggtcgat
tctgagatgatgctcggctcgcttgagctcgaaggatatacgactgtggaggacccggct
gaggcggaattgctccttattaatacctgcggatttattcgtccggctgtggaagaggct
gtggatgaaatcctccgccttgcagagtataaacaggatgacccaacgaaaaaattggtg
gtcaccggttgcatggtccagcgttacggcaaagacctgcaagaggaactccctgaggtg
gatttttttgtcgggattgatgaggaactggagatcgcgtccttggtgaagggctggtcc
ccaggcagtccctccttgtttcttaaagggccttcctctttccttgccgatagcggtgtg
ctgcgcagattggcaaccccgttttttcgcagttatctcaaaatcaccgagggctgtgat
aatcgctgtacctattgcatgattccaatgatacgaggtgacctccgcagcagatctgtt
caggatttgattatcgaggccaaggccctggagcagggcggggtaaaggagctgtctctg
atcgctcaggatctgaccgcttacggcgatgatctcaaagccggggagaatcttgtctcg
cttttagagcagctccttgccgaaacagaaatcccctggtttcgcctactctacctctat
ccctcttccgtttctgtagagctccttgagttgatggctgagcacccccgtattctgccc
tatctggatatcccctttcaacatgtcagtggtcctgtcctacagagaatggggcggcgc
tacgggcaacaggagctggagcaactcatcaccacgatccgccggattttacccgactgt
gccctgcgcactactatgatggtcggctttcccggagaaacagaagatgatatagaaaag
ctcattgattgtctgcaaagatggcgattagatcatgtgggtgtttttccttacgaggcg
gaacagggatcaatcgcagctgatttgccggaaaaggtggaaagaaaggtccgcgaggaa
cgttttgcccaggttatggaggtgcaggcggaggtcagcgcacaacgcctggagcagtat
gtcggaaggaaagaggtcgttttggtcgaaggagtgagtcaggagacagacttgctctta
gagggacgaacccgatatcaggcgccagatattgacggttgtgtctttattaacgatggg
atagcaaaccccggtgatatcgtgacagtagaaatcaccgaggcccatacatatgatctg
gtcggcggaattacccgctaa
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