Candidatus Electrothrix sp. GW3-4: WGN25_18395
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Entry
WGN25_18395 CDS
T11264
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
elgw Candidatus Electrothrix sp. GW3-4
Pathway
elgw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
elgw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WGN25_18395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elgw03000
]
WGN25_18395
Transcription factors [BR:
elgw03000
]
Prokaryotic type
Helix-turn-helix
Other families
WGN25_18395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
AAA_5
GAF
HTH_8
GAF_2
AAA
AAA_2
Mg_chelatase
bpMoxR
AAA_16
AAA_7
DUF815
AAA_30
nSTAND3
AAA_22
HTH_50
AAA_14
AbpB_N
AAA_3
ATPase
APC_N_CC
NUDE_C
RsgA_GTPase
nSTAND6
Chropara_Vmeth
NACHT
ABC_tran
XRCC4_CC
CC190
Motif
Other DBs
NCBI-ProteinID:
WYD83922
LinkDB
All DBs
Position
complement(4156956..4158584)
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AA seq
542 aa
AA seq
DB search
MTTDLDTSIKNQELARQDLSCLYEITKILAAGTDLQESLNRVVRVLADMKKMENGTVTIV
NPLTRELEIEVACGITATAQKKGKYKLGEGITGRVVSTGEPVIVPRIGEEPLFLNRTGIR
NDEKKKKSSFICVPIKVTFESSKQKIFTQDLHNRSDNLSIGALSVARYYENEFGLQSEQD
LRFLTIVSALIAQAVHRVQVINREKEALQQENQRLRRELSAKNRLSDIIGNSSRMQEVFE
MAHRVADSNATVLLRGESGTGKSLVAKALHHNSRRADKPFLVVNCSALPENLLESELFGH
EKGAFTGAEQRKKGRFELAEGGTLFLDEIGEISTTVQIKLLNVIQERCFQRLGGTEIIKA
DIRLVAATNRNLEEAVLEGLFREDLYYRLNVFPVHLPPLRERRTDILLLAEYFLEQYCKE
NNKRIERISTTAIDLLIKYHWPGNVRELQNCMERAVLICDSNTISSVHLPPTLQSSDSVS
TDSPLSLSGAVESFERELIIDALKHTNGNQTKAAARLETSLRIINYKIHNYGIDPKQFKV
RS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgacttagatacttcaataaaaaatcaagaacttgcgcgtcaagatctctcc
tgtctttacgaaattacgaaaattcttgctgccgggaccgaccttcaggagagtttgaac
agggtggttcgggtgctggcagatatgaaaaaaatggaaaacggtaccgtaactatcgtt
aatccactgacaagggagctggagattgaggttgcctgcgggattacggcaacagcgcaa
aaaaaagggaaatataaattaggcgaaggaattaccggtcgagttgtttccaccggagaa
ccggttattgtccccagaatcggagaagagccgttatttctcaatagaaccgggattagg
aatgacgagaagaaaaagaaaagttcctttatctgcgtacctattaaggttacttttgaa
agttccaaacaaaaaatctttacgcaggacctccataaccggtcagataatctgtccata
ggagccttgtctgttgctcgttactatgaaaacgaatttggtctgcaatcagagcaggat
ttgcgttttctcactattgtaagtgcccttatcgcccaggccgtacacagggtgcaggtt
atcaacagggaaaaagaggcgctccagcaggaaaatcaacgcctgcgcagagagctctcc
gccaagaatcgcctcagtgatattattggaaattcttcacggatgcaggaagtctttgaa
atggcccatcgagttgcggactccaatgccacggttctgctgcggggtgaatctggaaca
ggtaagtccttagttgccaaggccttacatcataattctcgtcgggcagacaaacccttt
ttggtggttaactgctcagctctcccggaaaaccttttagaaagcgaattattcggccat
gagaaaggggcctttaccggggccgagcaacgaaagaaagggcggtttgaattagcagaa
ggtggaaccctctttttagatgaaatcggtgagataagcaccactgtccagataaaactg
ctcaatgtgattcaggaacgctgctttcagcgtctcgggggaactgaaattatcaaagcg
gatattcgcttggttgcggccaccaatcgtaatcttgaggaagccgtccttgaaggcctc
ttccgggaggatctctattacagactcaatgtctttcctgttcaccttcctcctctcagg
gagaggaggacagatatccttctgctggcggaatattttctcgagcaatattgcaaagaa
aataataagcggattgaacgaatctcgaccaccgccattgacttattgataaaatatcac
tggccgggcaatgttcgtgaattacaaaactgcatggaacgagctgtccttatctgtgac
tccaatacaataagctcggttcaccttcctcctaccttacaaagctctgactctgtgagc
actgacagtccgctctctttatccggtgcagtggagagctttgagcgggagttgattatt
gatgcactcaagcataccaacggtaaccaaaccaaggcagcggcccgcctggagacaagt
cttcggattatcaattataaaatacataattacggtattgatccgaagcagttcaaggtg
aggtcatga
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