Candidatus Electrothrix sp. GW3-4: WGN25_19175
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Entry
WGN25_19175 CDS
T11264
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
elgw Candidatus Electrothrix sp. GW3-4
Pathway
elgw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elgw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WGN25_19175 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elgw03400
]
WGN25_19175 (recD)
Enzymes [BR:
elgw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WGN25_19175 (recD)
DNA repair and recombination proteins [BR:
elgw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WGN25_19175 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
UvrD_C_2
AAA_11
SH3_13
UvrD-helicase
NAT10_TcmA_helicase
PhoH
AAA_22
UvrD_C
SLFN-g3_helicase
AAA_16
DEAD
nSTAND3
AAA_28
NACHT
T2SSE
AAA_5
AAA
Motif
Other DBs
NCBI-ProteinID:
WYD84071
LinkDB
All DBs
Position
4308068..4309996
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AA seq
642 aa
AA seq
DB search
MHKQLQQACDQGEIRLLDLHLGLFLEKQALDKADRPAPPSLLLAATLASAAVGNGHVCYP
LEETPEQATLAELVQERCPDLEQWRKDLLATTVVGLPGETSPLILDEKNRLYLYRFSCYE
AFIAAALRRRAAAQLDLDPQRAAQVLRRLFPRNEESNSTDFQQMAAALALLKPLVIISGG
PGTGKTHTVARILAAIQALHAKQQEEQKGQRKKLLRIALAAPTGKAAARLEESIRKAKLS
LPEELRQDIPEQALTLHRLLGSRPGATAFRFNRENPLYLDLLILDEASMIDVEMMVAILE
ALPEKTRIILLGDRHQLASVEAGSLFADLCGEGKPHWSSQLCTALEQLTGSAMPSSLSSP
ISAQGAEEGSAQAADNPLADSLVLLHTSYRFQDESGIGALAAAVKSGSVEQVSQVIAEDF
VDVEVVQHSGAKRVQWLAEQIRKGFQPMLKASSPEQAFAAMEEFRFLCALRKGPDGVEGI
NTLVTQVLRRAGLIAPHKTDWYQGRPIMILRNHYEMQLFNGDTGILWRDGKGSLRAWFRR
ADNSLTSISPARLPEHETAYALTIHKAQGSEFEQVLLLLPEEDSRVLSQELFYTGITRAR
SSLSLCASSERIAATVCRKTQRFSGLAEKFCGLKKMQRGSII
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcataagcagctgcaacaggcctgtgaccagggcgaaatacgactcctggacctccac
cttgggcttttcctggaaaagcaggccctcgacaaggctgatcggccagcgcctccctcc
ctcctccttgccgcaaccctggcaagtgccgctgtggggaatgggcatgtctgctatccc
ttagaagaaacaccagaacaggcaaccttggcagagcttgtgcaggaacgctgccctgac
ctggaacaatggcgcaaggacttgcttgccaccacggttgttggccttcccggcgagacc
tcccccctgatccttgacgagaagaaccggctctacctctatcgtttctcctgctacgag
gcatttattgccgcagccctgcgacgtcgggcagcagcccagcttgatcttgatccgcag
cgtgccgcccaggtgctgcgccgactttttccccggaacgaagaaagcaacagcactgat
tttcagcagatggccgcagccctggccctgctgaaacccttggtgattatctctggcgga
cccggaaccggcaagactcacaccgtggctcgcatcctggctgcgatccaggccctgcat
gccaaacagcaggaagagcagaaggggcagaggaaaaagctcctcaggattgccctggct
gccccgacagggaaggcagctgcccgcctggaggaatccatccgtaaggccaagctctcc
ttgcccgaggagcttcggcaggatatcccggaacaggccctgaccctgcaccgcctgctt
gggtcccggcccggagcaactgcgtttcgttttaatcgggagaacccgctctatctggac
ctgctgatcctggatgaggcctcgatgattgatgtggagatgatggtcgccatcctggag
gccctgccggaaaagacccgcattatcctgctcggggatcgccatcagctggcctcagtg
gaggcgggcagcctgtttgccgacctctgcggtgaggggaagccccattggtcttcccaa
ctttgtactgccttggagcagctgaccgggagcgccatgccctcttccctctcctcccca
atctctgcgcagggagcagaggagggatccgctcaagcagccgataatcccctggccgat
tcgctggtcttgctgcataccagttatcgttttcaggatgagagtgggatcggtgccctt
gctgccgccgtgaagagtggttctgtggagcaggtgagccaggtgatagcagaagatttt
gttgatgtggaggtggtgcagcatagcggggccaagcgggtgcaatggctggcagagcag
atacgaaagggctttcagcccatgctgaaggcctcttccccagaacaggcctttgccgcc
atggaagagtttcgttttctctgtgccctgcgcaaaggaccagacggggtggaagggatc
aataccctggtgacccaggtcctgcggcgagctggtttgattgctccccacaagacggac
tggtaccaaggacgaccgatcatgattctccgcaatcactatgagatgcagctctttaac
ggggataccggcatcctctggcgggacgggaaggggagcctacgagcctggttccgccga
gcggataacagcctgacttcaatctctccagcccgcttacctgaacatgagacggcctat
gctcttacgatccataaggcccagggctcggagtttgagcaggtcctgctgctcttgccg
gaagaagacagccgggtgctcagtcaggaacttttctacaccggtattacccgggcccgc
agcagcctttccctctgtgcatcttcagaaaggatagcagcaacggtctgccgcaagacg
cagcgtttttctggtttggcggaaaaattctgtggcttgaaaaaaatgcagcgtggttca
attatttga
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