KEGG   Escherichia coli O78 H11 K80 H10407 (ETEC): ETEC_1688
Entry
ETEC_1688         CDS       T02069                                 
Name
(GenBank) probable ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
elh  Escherichia coli O78:H11:K80 H10407 (ETEC)
Brite
KEGG Orthology (KO) [BR:elh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:elh03400]
    ETEC_1688
Enzymes [BR:elh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ETEC_1688
    5.6.2.6  RNA 3'-5' helicase
     ETEC_1688
DNA repair and recombination proteins [BR:elh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ETEC_1688
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr DEAD WHD_3rd_Lhr WHD_4th_Lhr Helicase_C ResIII AlkZ-like Replic_Relax WHD_MCM4 DDRGK
Other DBs
NCBI-ProteinID: CBJ01192
LinkDB
Position
1828366..1832982
AA seq 1538 aa
MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA
AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG
ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE
VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA
MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN
SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS
KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV
GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD
EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL
LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI
TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN
TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR
IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF
RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA
LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL
LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH
TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV
SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV
FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM
RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH
LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQE
ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN
LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS
GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP
AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP
RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG
NT seq 4617 nt   +upstreamnt  +downstreamnt
atggcagataatccagacccttcatcgctcctgccggacgtgttttcaccggcgacccgc
gactggtttcttcgcgcctttaaacagccgaccgctgtccagccgcaaacctggcatgtg
gcggcgcgaagcgaacatgcgctggtgattgcaccgaccggctccgggaaaacgctggca
gcatttctctacgccctcgatcggctcttccgcgaaggcggcgaagatacccgcgaggcg
cataagcgtaaaacctcacgcatcctctatatttcaccgataaaagccctgggcaccgac
gttcagcgcaacttgcagatcccgttgaagggtattgccgatgaacggcggcggcgcggc
gaaacggaagtcaatcttcgcgtagggatccgtactggcgatacgcctgcacaggaacgc
agcaaactcacccgtaatccgccggatattctgatcaccacacccgaatcactctatctg
atgctgacctcccgcgcgcgcgaaacgctacgcggcgtcgaaacggtaattattgatgaa
gtccacgcggtagcgggtagtaaacgtggtgcgcatctggcgttaagtctggagcggctc
gatgcgctgctccacacctcagcacagcgaattggcctttctgccactgtgcgctcagcc
agcgatgtggcagcatttcttggtggcgatcgcccggttacggtagtcaacccgcccgca
atgcgccatccgcagatacgaattgtcgtaccggtcgccaatatggatgatgtctcatcg
gtcgccagcggcaccggcgaagacagccatgccggccgggaaggctccatctggccatat
attgaaacgggtatccttgatgaagtgttgcgccatcgctcgaccattgtctttactaat
tcgcgggggctggcggaaaaactgacggcacgattaaatgagctttacgccgcacgctta
cagcgttccccgtctatcgccgttgatgcggcccatttcgagtcgacctccggcgcaacc
tctaaccgtgtacaaagtagcgacgtttttattgcccgctcacaccacggctccgtctct
aaagaacaacgagcaatcaccgaacaggcgctgaaatcgggtgaattacgctgcgtggtc
gcaacctccagtcttgaactggggattgatatgggcgcggtggatctggtgattcaggtg
gcaacgccgctttctgttgccagtgggttacaacgcattggtcgcgccggacatcaggtt
ggcggtgtatctaaagggctgtttttcccccgtacccggcgtgatttagtcgattccgca
gtcattgtagagtgtatgttcgcaggcaggctggaaaacctgacaccaccgcataatcct
ctcgacgtccttgcgcagcaaaccgttgccgccgcggcgatggatgcattacaggtagac
gaatggtactcccgcgtacgccgtgccgcaccgtggaaagatctgccaagacgtgttttt
gacgccacgctggatatgctttccgggcgctatccctctggcgatttttctgcttttcgc
cccaaactggtctggaacagggagaccgggatattgaccgcccgacctggcgctcaattg
ttggcggttaccagcggcggcaccattccggatcgtggcatgtatagcgtgttattaccc
gaaggtgaagaaaaggccggttcgcggcgggtgggtgaactggatgaggagatggtatat
gagtcgcgggtgaacgacattatcactctcggcgctacctcatggcggatccagcaaatc
acccgcgatcaggtgattgtgactcctgctccgggtcgttctgcccggctccccttctgg
cgtggtgaaggtaacggacgtccggctgaattaggcgagatgatcggcgattttcttcat
ttgctggcggatggcgcgttcttttccgggactattcccccgtggctggcagaagaaaat
acgatcgccaatattcaggggttgattgaggagcagcgcaacgcgacgggcatcgttccg
gggagtcgccatctggtcctcgaacggtgccgtgatgaaattggtgactggcgtattatt
ttgcactctccctatggaagacgggtgcatgaaccctgggcggtggcgattgccgggcga
atacatgcgctatggggcgctgacgcgtcggtggtcgccagtgatgacggcattgttgca
cgtattcctgacaccgatggtaaattgcccgatgccgcgatttttttgtttgaaccagaa
aagttgctgcaaattgtccgcgaggcggtaggcagctcggcacttttcgccgcccgtttt
cgcgaatgcgccgcgcgggcattattaatgccggggcgcactccgggccatcgcaccccg
ctttggcaacaacggctgcgcgccagtcagttgctggaaatcgctcagggatatccggat
tttccggtcattctcgaaaccctacgcgaatgtctgcaagatgtttatgatcttcccgca
ctggaacgtttgatgcgtcgcctgaacggtggcgaaattcaaatatccgatgtaacgacc
actacgccctcgcctttcgccacaagtttattgttcggctatgtcgcggaatttatgtac
cagagcgacgccccgctggcagagcgccgggcatccgtactgtcgctggacagcgagtta
ctgcgcaatctactcggacaggtcgatccgggggaattactcgacccgcaggtcattcgc
caggtggaagaagagttgcaacgactggctcctggcagaagagcgaaaggtgaagaagga
ttgttcgacctgctgcgcgaactggggccaatgaccgttgaagacctggcgcaacggcat
acaggcagcagtgaagaggttgcgtcgtatctggaaaatcttcttgcagtaaaacgaatc
ttcccagcgatgattagcggacaggagcgtcttgcctgtatggatgatgccgccaggctg
cgtgatgccctcggcgtacgactaccagagtcattgccagagatttatttacatagagtc
agttacccgcttcgcgacctctttctgcgctatctccgggctcatgctctggtcacggct
gaacaactggctcatgagtttagtctcggtattgccattgtcgaagagcagcttcagcaa
ctgcgtgaacagggtctggtgatgaatctgcaacaagacatctgggtgagcgatgaagta
tttcgtcgtctgcgtttgcgctcgctgcaagccgccagagaagcgacgcgtcccgttgca
gccacgacctatgcgcgattgctgctggaacgtcagggcgtattacccgccaccgatggt
agcccggcgctctttgcctcaacatcgccaggcgtttatgagggcgtagatggcgtgatg
cgggtgatcgaacagcttgccggagtcggtttacccgcctcactctgggaaagccagatc
ctgcctgcccgcgtacgcgactattcgtcagaaatgctcgatgaattactggcaaccggt
gcggttatctggtcggggcaaaaaaaactgggtgaagatgacggcctggtggcactgcat
ctacaggaatatgctgcagaatcgttcactcccgccgaagcggatcaggcgaatcgttcg
gcgctgcaacaagcgatagtcgctgttctggctgacggaggagcctggtttgcacaacaa
atcagccaacggatacgcgacaaaatcggcgaatcggttgatctctctgccctgcaagag
gcgttatgggcgctggtctggcaaggcgtcatcaccagcgacatttgggcaccgttacgc
gccctcacccgcagcagttccaacgcacgcacctcaactcgccgcagtcaccgggctcgt
cgtggacgtcctgtctatgcgcaacccgtctcgccgcgggtatcttacaacacaccaaat
ctggctggacgctggtcgttattgcaggtggagccactaaacgataccgaaaggatgctg
gcgctggcggaaaatatgctcgaccgctacggcatcatcagtcgtcaggcggtgatagcc
gaaaatatccctggcgggtttccatcgatgcaaacgctttgtcgaagtatggaagactcc
gggcgaattatgcgaggtcgttttgtagaaggtctgggtggcgcgcaattcgctgaacgt
ctgactattgaccgattgcgcgatctggcgacacaagccacgcaaacgcgccactataca
ccagtggcgctctctgccaacgatccggctaatgtgtggggaaatcttctgccctggcct
gcacatccggcaacgctggttccaacgcgtcgggcgggtgcgctggtggtcgtttctggc
ggcaaattgttactctatctggcgcaaggtggcaaaaaaatgctggtctggcaggaaaaa
gaggaattactcgccccagaggttttccacgcgctgactaccgcactgcgtcgcgaacca
cggctgcgctttacgctaacagaagtgaatgatctaccggtccggcaaacgccgatgttt
acgctgctgcgtgaggcgggattttcaagttcgccacaagggctggattggggatag

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