Escherichia coli O78 H11 K80 H10407 (ETEC): ETEC_3160
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Entry
ETEC_3160 CDS
T02069
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
elh
Escherichia coli O78:H11:K80 H10407 (ETEC)
Pathway
elh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
elh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ETEC_3160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elh03021
]
ETEC_3160
Transcription machinery [BR:
elh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ETEC_3160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
PhyR_sigma-like
HTH_36
HTH_28
HTH_23
HAC6_helical
HTH_11
TnsD
PCI
DUF2774
HTH_40
HTH_3
GerE
HTH_IclR
HTH_Mga
HTH_10
MarR
Motif
Other DBs
NCBI-ProteinID:
CBJ02660
LinkDB
All DBs
Position
3415863..3416384
Genome browser
AA seq
173 aa
AA seq
DB search
MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMVSETLSTIRD
PRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPSPEERESQLETLQLLDSMLDG
LNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKAVEHCLLFRLEYGL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgcgccactaccacagcttccttaacgttcgagtcgctttatggcacacat
cacggctggttgaaaagctggctgacgcgcaaactccagtctgcttttgatgcagatgac
attgcccaggacacttttttgcgggtaatggtcagcgaaacgctctcgacgatccgcgat
cctcgctccttcctgtgcactatcgccaaacgcgtgatggtggacctgtttcgccgaaac
gcgctggaaaaagcgtatctggagatgctggcgcttatgccggaggggggagcgccttca
cctgaggaacgcgaaagccaactcgagaccctacaactcctcgacagcatgctggacggg
ctaaacggcaaaacacgtgaagcgtttctgctttcgcaactggatggtctgacatacagc
gagattgcgcacaaactcggtgtttccatcagctccgtgaaaaaatacgtggcgaaagcc
gtcgagcactgcctgctgttccgtctggagtatgggttatga
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