Escherichia coli O78 H11 K80 H10407 (ETEC): ETEC_4490
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Entry
ETEC_4490 CDS
T02069
Name
(GenBank) 60 Kda chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
elh
Escherichia coli O78:H11:K80 H10407 (ETEC)
Pathway
elh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETEC_4490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elh03019
]
ETEC_4490
03110 Chaperones and folding catalysts [BR:
elh03110
]
ETEC_4490
03029 Mitochondrial biogenesis [BR:
elh03029
]
ETEC_4490
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
elh04147
]
ETEC_4490
Enzymes [BR:
elh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ETEC_4490
Messenger RNA biogenesis [BR:
elh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ETEC_4490
Chaperones and folding catalysts [BR:
elh03110
]
Heat shock proteins
HSP60 / Chaperonin
ETEC_4490
Mitochondrial biogenesis [BR:
elh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ETEC_4490
Exosome [BR:
elh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ETEC_4490
Exosomal proteins of other body fluids (saliva and urine)
ETEC_4490
Exosomal proteins of breast cancer cells
ETEC_4490
Exosomal proteins of colorectal cancer cells
ETEC_4490
Exosomal proteins of bladder cancer cells
ETEC_4490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CBJ03999
LinkDB
All DBs
Position
4876604..4878250
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagatgcagtgaaagttaccctcggtccgaaaggccgtaacgtagttctg
gataaatctttcggtgcaccgaccatcaccaaagatggtgtttccgttgctcgtgaaatc
gaactggaagacaagttcgaaaacatgggtgcgcagatggtgaaagaagttgcctctaaa
gcgaacgacgctgcaggcgacggtaccaccactgcaactgtactggctcaggctatcatc
actgagggtctgaaagctgttgctgcgggcatgaacccgatggacctgaaacgtggtatc
gacaaagccgttaccgctgcagttgaagaactgaaagcgctgtccgtaccgtgctctgac
tctaaagcgattgctcaggttggtaccatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgctgaagcgatggacaaagtcggtaaagaaggcgttatcaccgttgaagacggt
accggtctgcaggacgaactggacgtggttgaaggtatgcagttcgaccgtggctacctg
tctccttacttcatcaacaagccggaaactggcgcagtagaactggaaagcccgttcatc
ctgctggctgacaagaaaatctccaacatccgcgaaatgctgccggttctggaagccgtt
gccaaagcaggcaaaccgctgctgatcatcgctgaagatgtagaaggcgaagcgctggca
actctggttgttaacaccatgcgtggcatcgtgaaagttgctgcagttaaagctccgggc
ttcggcgatcgtcgtaaagctatgctgcaggatatcgcaaccctgactggcggtaccgtg
atctctgaagagatcggtatggaactggaaaaagcaaccctggaagacctgggtcaggct
aaacgtgttgtgatcaacaaagacaccaccactatcatcgatggcgtgggtgaagaagct
gcaatccagggccgtgttgctcagatccgtcagcagattgaagaagcaacttctgactac
gaccgtgaaaaactgcaggaacgcgtagcgaaactggcaggcggcgttgcagttatcaaa
gtaggtgctgctaccgaagttgaaatgaaagagaaaaaagcacgcgttgaagacgccctg
cacgcgacccgtgctgcggtagaagaaggcgtggttgctggtggtggtgttgcgctgatc
cgcgtagcgtctaaactggctgacctgcgtggtcagaacgaagaccagaacgtgggtatc
aaagttgcactgcgtgcaatggaagctccgctgcgtcagatcgtcctgaactgcggcgaa
gaaccgtctgttgttgctaacaccgttaaaggcggcgacggcaactacggttacaacgca
gcaaccgaagaatacggcaacatgatcgacatgggtatcctggacccaaccaaagtaacc
cgttctgctctgcagtacgcggcttctgtggctggcttgatgatcaccaccgagtgcatg
gttaccgacctgccgaaaaatgatgcagctgacttaggcgctgctggcggtatgggcggc
atgggtggcatgggcggcatgatgtaa
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