Erythrobacter litoralis HTCC2594: ELI_05665
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Entry
ELI_05665 CDS
T00315
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
eli
Erythrobacter litoralis HTCC2594
Pathway
eli02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eli00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ELI_05665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eli03021
]
ELI_05665
Transcription machinery [BR:
eli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ELI_05665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
DUF6712
Disulph_isomer
DUF4168
Motif
Other DBs
NCBI-ProteinID:
ABC63225
UniProt:
Q2NAR6
LinkDB
All DBs
Position
complement(1170672..1172699)
Genome browser
AA seq
675 aa
AA seq
DB search
MASKAKKKTQAEDAPLIDLNEASIKKMITKAKRKGYVTYDELNEALPSGEMSPDQIEDIQ
TSLSEMGVQIVESDEEAEAEQEQANEVEEIAPGAAKDEKKDAKKPAAAVKKTTTGDRTDD
PVRMYLREMGAVELLSREGEIAIAKRIEAGRDTMIIGLCQSPITFHAIIQWSEALNAEEM
QLREILDLDAMLSKEPPAEKLEEGAEDDDDGEISEENAGPTIVDDDDDTDDEDSDDEDGE
EGSSKSDDDEDEDNTMSLAQMEAALKPDAIERFARITSLFKKFEKLQLERVDTIARGEVL
PKAKENRYEKLGEELTAEVESMQFHATKIEFLVDNLYAFNRRLTALGGQMLRLAERHKIK
RADFLQAYIGNELDEDFLKDRVKKDKKWAAFADKEADAIDRIRTEIADIASQTGMALPEF
RRIVNMVQKGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQFLHEQGREP
TPEEMAERLSMPLEKVRKVMKIAKEPISLETPIGDEEDSHLGDFIEDKNAIIPVDAAIQA
NLKETVTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKL
KHPSRSRKMRSFLDQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaggcgaagaagaaaacccaggcggaagatgctcccctgatcgatctcaac
gaagcttcgatcaagaagatgatcaccaaggccaagcgcaagggctacgtcacctatgat
gagctcaacgaagcgctgccttcgggcgaaatgagccccgaccagatcgaggatatccag
acttcgctgtccgagatgggcgtgcaaatcgtcgagagcgacgaggaggccgaggccgag
caggaacaggccaacgaggtcgaggaaatcgcgcccggcgccgccaaggacgaaaagaaa
gacgccaagaagcccgccgctgccgtaaaaaagacgaccaccggcgaccgtaccgacgat
ccggtgcggatgtatctgcgcgagatgggcgcggtcgaattgctcagccgcgaaggcgaa
attgccattgccaagcggatcgaggccggtcgcgacacgatgatcatcggattgtgccag
agcccgatcaccttccacgccatcatccagtggtccgaagcgctcaatgccgaggaaatg
cagctgcgcgagatcctcgatctcgatgccatgctgtccaaggagccgccggccgagaag
ctggaggaaggcgccgaggacgatgacgatggcgaaatctcggaagagaatgccggcccg
accatcgtcgacgatgacgacgataccgatgacgaggattcggacgacgaggacggcgaa
gagggcagcagcaagtccgacgacgatgaggacgaggacaacaccatgtcgctcgcgcag
atggaagcggcgctgaagcccgatgccatcgagcgctttgcgcgcattacctcgttgttc
aagaaattcgagaaactgcagctagagcgtgtcgataccatcgcccgcggcgaagttctg
cccaaggcgaaagagaaccgctacgagaagctcggcgaggaactgaccgccgaagtcgag
agcatgcagtttcacgccaccaagatcgaattcctggtcgacaatctgtatgccttcaac
cgccgcctgaccgcgctcggcgggcagatgctgcgcctcgcagagcgccacaaaatcaag
cgcgcggacttcctgcaggcctatatcggcaacgagctcgacgaggatttcctcaaggac
cgtgtcaagaaggacaagaagtgggctgccttcgccgacaaggaagccgacgcgatcgac
cgcatccgcacggagatcgccgatatcgccagccagaccggcatggccctgcccgagttc
cgccgcatcgtgaacatggtgcagaagggcgaacgcgaggcgcgcatcgcgaagaaggaa
atggtcgaggcgaatcttcgcctggtgatttccatcgccaagaaatataccaaccgcggc
ctgcaattccttgatcttattcaggaaggcaacatcggcctgatgaaggcggtcgacaag
ttcgagtaccgccgcggctacaagttcagcacctacgccacatggtggatccggcaggcg
atcacccgctcaatcgccgaccaggcccgcacgatccgtatcccggtccatatgatcgag
acgatcaacaagctggtccgtaccagccgccagttcctgcacgagcagggccgcgagccg
acaccggaagaaatggccgagcgtctttcgatgccgctcgagaaggtgcgcaaggtgatg
aagatcgccaaggaaccgatcagcctcgaaacgccgatcggcgacgaagaggattcgcac
ctcggcgatttcatcgaggacaagaacgccatcatcccggtcgatgcggcgatccaggcg
aacctcaaggaaaccgtcacccgcgtgctcgccagcctgactccgcgcgaagaacgcgtg
ctgcgcatgcgcttcggcatcggcatgaacaccgatcacacgctcgaggaagtcgggcag
cagttttcggtgacgcgcgaacgcatccggcagatcgaggccaaggcgctgcgcaagctc
aagcacccgagccgcagccgcaagatgcggtctttcctggatcaataa
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