Erythrobacter litoralis HTCC2594: ELI_06980
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Entry
ELI_06980 CDS
T00315
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
eli
Erythrobacter litoralis HTCC2594
Pathway
eli03030
DNA replication
eli03430
Mismatch repair
eli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ELI_06980
03430 Mismatch repair
ELI_06980
03440 Homologous recombination
ELI_06980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eli03032
]
ELI_06980
03400 DNA repair and recombination proteins [BR:
eli03400
]
ELI_06980
Enzymes [BR:
eli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ELI_06980
DNA replication proteins [BR:
eli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ELI_06980
DNA repair and recombination proteins [BR:
eli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ELI_06980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
COE1_HLH
DUF655
Motif
Other DBs
NCBI-ProteinID:
ABC63488
UniProt:
Q2NA03
LinkDB
All DBs
Position
complement(1446920..1450411)
Genome browser
AA seq
1163 aa
AA seq
DB search
MAFAPFVPLRVLSSYSMLEGAIDPKALAKLAKERGFPAIAICDRNGLYGAVAFAGACRDE
GIQPIIGALVGVARPGSDAIDHLPLYAQDEAGYLNLCHLVSKAHLERPVELVPHVSLDDF
DGRTEGLIALTGASEGGVTQLLAEGQKDHAEAYCDRLQALFPERLYVELSRRGNAVEQAA
EEALVDLAYARDLPLVATNPANFAEPGFHKAHDAMLCIAGSYKIHEEDRPRTDQQAWVKS
DRMMGEIFEDLPEATANTLVIAQRCAYAPPYRDPILPSLAGDLEGEERMLRELSTKGLEK
RLEPYEDLSDEDREEYFERLDYEIGIINRMGFPGYFLIVADFIQWAKDHGIPVGPGRGSG
AGSLVAWALTITDLDPIRLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQERYGHD
KVAQIITFGKLKARAVLRDVGRIVDYGYNRTDRLCKMVPNHPTDPWTLPRALNGSAEFKA
EYSNDNDTKALIDLAMQLEGLPRNSSTHAAGVVIGDRPLSQLVPLYRDPRSDMPVTQFDM
KHVESSGLVKFDFLGLKTLSVLQKAVDLLEKRGIDVDLGALAWDDPAVYELMKSGNTVGV
FQLESEGMRRTLTAVKPTKFEDIIALVSLYRPGPMDNIPLFGKRKAGLEPIEYPHPKLEE
ILAETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKNQAEMDKQRAIFVEGCAKVS
DIDADKANELFDLINKFAGYGFNKSHAAAYALLAYQTAWLKAHYPEEFYAASMCFDMHQS
EKLAVFVDDARRYPLVEGGIVVAPPDINASEAEFTVERTDDGYAVRYALAGIRNVGEKAM
DAIVREREANGVFESLGDLFDRLPQGAMNSRQLEALIAAGALDGLEPNRGKLAANVDLLL
ATADAAIRERTSGQEALFGGDLAAEDTLRLKDAEDWDRPTRMAKERENFGFYFSEHPVEH
FRDVASANGARPYASLMTGGAPAGGRSKAMMAAMVEKVNIGTTRRGAQFVRADFSDSSGQ
FSAACFEDSLVESFKTWAADGTCVLLTVELDSPSPDEPPRITVRGARPLNTVAGSQRMLM
TLDVASEDAIAELALALQLGEAGHGEVRVRLNLGEGMVASMRLGHDFRLDGKLAEQLQAI
PGIANVRLVPKAGPQGRRFNKAA
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggccttcgctcccttcgtccctctacgcgtcctgtcgagctattcgatgctcgaaggc
gcgatcgatccgaaggcgctggcgaaactggcgaaggaacgcggctttccagccatcgcg
atttgcgaccgcaacgggctctacggcgcggtggcctttgccggggcctgtcgcgacgag
ggtatccagccgatcattggagccttggtgggcgtggctcggccaggctcggacgcaatc
gatcacttgccgctctatgcacaggacgaagcgggctatctcaatctctgtcacttggtc
agcaaggcgcatctggagcggccggtcgaactggtgccgcatgtttcgctcgacgatttc
gacggccgcaccgaaggcctgattgcgctgaccggcgcgagcgagggcggggtcacgcag
ctgctggcagaaggccagaaggaccacgccgaagcctattgcgaccgcctgcaggcactc
tttcccgagcggctttatgtcgaactgtcgcggcggggcaacgcagtcgagcaggccgcc
gaagaggcgctggtggacctggcttatgcccgcgacctgcccttggtcgcgaccaaccct
gccaacttcgccgagcccggtttccacaaggcgcatgacgcgatgctgtgcatcgccggc
agctacaaaatccacgaggaagaccgcccgcgcaccgaccagcaggcgtgggtcaagtcc
gaccggatgatgggcgagatattcgaggacctgcccgaagccaccgccaatacgctcgtg
atcgcgcagcgctgcgcctatgcgccgccctatcgcgatccgatcctgccgagcctcgct
ggcgatctcgaaggcgaggagcggatgttgcgcgagctttcgaccaagggcctcgagaaa
cggctggagccctacgaggacctctcggatgaagaccgcgaggaatatttcgagcggctc
gattacgagatcggcatcatcaaccgaatgggtttccccggctacttcctgatcgttgcc
gacttcattcaatgggccaaggaccacggcatcccggtggggccgggacgcggttcgggt
gcgggttcgctggtcgcctgggcgctgaccatcaccgatctcgatccgatccgtctgggg
ctgctgttcgagcgcttcctcaacccggaacgcgtgtccatgccggacttcgacatcgat
ttctgcgagacgcgccgtggtgaagtcatccgctacgtgcaggagcgctacggccacgac
aaggtcgcgcagatcatcactttcggcaagctcaaggcgagggcggtgctgcgcgatgtc
gggcggatcgtcgactatggctacaaccgcaccgatcgcctgtgcaagatggtgcccaac
catccgaccgacccgtggaccctcccgcgcgcgctcaatggctcggcggagttcaaggcg
gaatattcgaacgacaacgacaccaaggcgctgatcgacctggcgatgcagctcgaaggg
ctgccgcgcaacagctcgacccatgcggcgggcgtggtgatcggcgaccgaccgctgtcg
cagctggtgccgctctatcgcgatccgcgctccgacatgccggtgacgcagttcgacatg
aagcatgtcgagagctccgggctggtcaagttcgatttcctcggcctgaagacgctgtcg
gtgctgcagaaggcggtcgacctgctggaaaagcgcgggatcgatgtcgatctcggcgca
ctcgcatgggacgatccggcggtctacgagctgatgaagtccggcaatacggtcggcgtg
ttccagctcgaatccgaaggtatgcggcgcacgctgacggccgtgaagccgactaagttc
gaagacatcatcgcgctcgtctcgctctatcgcccaggcccgatggacaacatcccgctg
ttcggcaagcgcaaggcggggctcgagccgatcgaatacccgcacccgaagctcgaggaa
attctggccgagacttacggcatcttcgtctaccaagagcaggtgatgcaggccgcgcag
atcctcgccggatactcgctcggcgatgccgacttgctgcgccgagctatgggcaagaag
aaccaggccgagatggacaagcagcgcgcgatcttcgtcgaaggctgcgccaaggtttcc
gatatcgatgccgacaaggccaacgaactgttcgacttgatcaacaagttcgccggttac
ggcttcaacaagtcgcacgcggcggcttacgcgctgctcgcctaccagacggcatggctc
aaggcgcattacccggaagaattctacgccgcgtcgatgtgcttcgacatgcatcagtcg
gagaagctggcggtattcgtcgacgatgcgcgccgctatccgctcgtcgaaggcgggatt
gtggtcgcgccgccggatatcaatgcgtcggaagccgagttcacggtcgagcggaccgac
gatggctatgccgtgcgctatgcgctcgctggtattcgcaatgtcggcgagaaagcgatg
gacgcgatcgtgcgcgagcgcgaggcaaacggcgtgttcgaaagcctcggcgatctgttc
gatcgtttaccgcaaggcgcgatgaattcccgccagctggaggcgctgatcgctgcgggc
gcgctcgacgggctggagcccaatcgcggcaagctcgccgccaatgtcgacctgctgctc
gccaccgccgatgccgcgatccgcgagcgtaccagcggccaagaggcgctgttcgggggc
gacctggcagcagaagacacactgcgcttgaaggacgccgaagactgggaccgcccgacc
cggatggcgaaggagcgagagaatttcgggttttatttctccgaacacccggtcgagcat
ttccgcgacgtcgccagcgccaacggcgcgcggccctatgcctcgctgatgacgggcggc
gcgcctgccgggggccgcagcaaggcgatgatggcggcgatggtcgagaaagtgaatatc
ggcacgacccgcagaggcgcacagtttgtgcgcgcggatttctccgacagttcgggccag
ttcagcgccgcctgcttcgaagacagtctggttgaaagcttcaagacatgggccgcggac
ggcacttgcgtgctgctgacggtcgaactggactcgccgtcgcccgacgagcctccgcgc
ataaccgtgcgcggggcgcggcccttgaacacagtcgccggtagccagcgcatgctgatg
acgcttgatgtcgccagcgaggatgccatcgccgaactcgcgctggcgctgcaattgggc
gaagcggggcatggcgaagtgcgggtgcggctgaacctcggcgaggggatggtggcgagc
atgcggctcggtcacgacttccgcctcgacggcaagctcgccgagcaattgcaggcgatc
cccggcatagccaatgtccgattggtgccaaaggccgggccgcaggggcgccgcttcaac
aaggcggcctga
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