Erythrobacter litoralis HTCC2594: ELI_14470
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Entry
ELI_14470 CDS
T00315
Name
(GenBank) DNA-directed RNA polymerase 160 kDa subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
eli
Erythrobacter litoralis HTCC2594
Pathway
eli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ELI_14470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eli03021
]
ELI_14470
03400 DNA repair and recombination proteins [BR:
eli03400
]
ELI_14470
Enzymes [BR:
eli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ELI_14470
Transcription machinery [BR:
eli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ELI_14470
DNA repair and recombination proteins [BR:
eli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ELI_14470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
YqfD
YnfE
Motif
Other DBs
NCBI-ProteinID:
ABC64986
UniProt:
Q2N5Q5
LinkDB
All DBs
Position
2912041..2916357
Genome browser
AA seq
1438 aa
AA seq
DB search
MNELTKFTNQLAKPETFDQIQIGIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRMKYKGVVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSL
PSRIGLLLDMQLKQLERVLYFEHYIVTEPGLTPLEKFQLLTEDELLEAQDEYGEDAFSAG
IGAEAVKFMLMDLDLEQEKEDLLEELATTKSKLKPAKIIKRLKVVESFIESGNRPEWMIL
EVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGP
ELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREH
PVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDMVLGLYYLSMERQEKTPEYIEEKDGTKIEKLPRF
ADMAEVHQALETKSVTLHTRIIARVPQADEDGKPEMKRFVTTPGRMLIGECLPKNHKVPY
DIVNRLLTKKEIGDVIDQVYRHTGQKDTVLFADAIMVLGFRHAFKAGISFGKDDMIIPDS
KEGMIEDTKKQVADYEQQYQDGLITQQEKYNKVIDAWSRCGDQVAEAMMDEIKSQKFDKD
GKESEINSIYMMSHSGARGSPAQMKQLAGMRGLMAKPSGEIIENPIISNFKEGLTVLEYF
NSTHGARKGLADTALKTANSGYLTRRLVDVSQDCVIVEEDCKTDNALEMRAIVQGGSVIA
SLGERILGRTLVDDLVNAKTDEVIVKAGTLLDEPMVKAIEEAEVQVARIRSPLVCEADQG
VCATCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNETSHLESIS
DGKVEYRDMPTITDKKGRILSLARNGELAVIDAEGREREIHKVPYGTVLMHKDGAKVKEG
DRLAEWDPFSLPIITEQSGVVKYQDLIEGTTLEEQTDDATGIAQRVVTENRATGRKKKED
LRPRLTLLSEGQSEDETEAQRYLLAPGTTLSVTDGQTVEAGDILARASREAAKTRDITGG
LPRVAELFEARVPKDNAVIAKISGKIEFVREYKAKRKIAIVPEEGEAVDYLIPKTKVIDV
QEGDFVKKGDTLISGSPNPHDILDVLGVEALAEYLCTEIQEVYRLQGVKINDKHIEVIVR
QMLQKVEITDGGDTVLLPGEQVDRDEMDEANAKLGRGKKPATGNPVLLGITKASLQTRSF
ISAASFQETTRVLTQASVEGKKDTLIGLKENVIVGRLIPAGTGAGMNRMRVTASARDAAL
RAQWKKQQEKLAAADEAAMAAEKEPEAEVMDADAMAAAMGGDSAGGDTKPEAPEASEE
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgaccaaattcaccaaccagctcgccaagccggaaacgttcgaccagatc
cagatcggcattgcctcgccggagcgcatccgctcttggtctttcggcgaaatcaagaag
ccggaaacgatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgtgcgcgc
atcttcggtccggtgaaggattacgaatgcctgtgcggcaagtacaagcgcatgaaatac
aagggcgtcgtttgcgagaagtgcggcgtcgaagtgaccgtcaccaaggtccgccgcgag
cgcatgggccacatcgagctggcggctccggtggcgcatatctggttcctgaaatcgctc
cccagccgcatcggcctgctgctcgacatgcagctgaagcagctcgagcgcgtgctctat
ttcgaacactatatcgtgactgagccgggcctgaccccgctggagaaattccagctgctg
accgaggacgaactcctcgaagcgcaggacgagtatggcgaagacgctttcagcgccggc
atcggtgctgaagcggtcaagttcatgctgatggatctcgacctcgagcaggaaaaggaa
gacctgctggaagagctagcgaccaccaagtccaagctcaagccggccaagatcatcaag
cgcctcaaggtcgtcgaaagcttcatcgaatccggcaaccgcccggaatggatgatcctc
gaagtcgtgccggtgatcccgcccgaactgcgcccgctcgtgccgctcgacggcggccgg
ttcgcgacgtccgatctcaacgatctctatcgccgcgtcatcaaccgcaacaaccgcctg
aagcgcctgatcgagctgcgcgcgccggacatcatcgtgcgcaacgagaagcgcatgctg
caggaatcggtcgatgcgctgttcgacaacggtcgtcgtggccgtgtcatcaccggtgcc
aacaagcgtccgctcaagtcgctcagcgacatgctcaagggcaagcagggccgcttccgc
cagaacctgctcggcaagcgcgtcgactattcgggccgttcggtcatcgtgacaggtccg
gaactcaagctgcaccagtgcggcctgcccaagaagatggcgctcgaactgttcaagccg
ttcatctacgcccgcttggatgccaagggtctttcgatgaccttgaagcaggccaagaag
tgggtcgagaaggagcgcaaggaagtttgggacattctcgacgaagtcattcgcgagcac
ccggttctcctgaaccgcgccccgacgctccaccgtctcggcatccaggcgttcgagccg
gtgctgatcgaaggcaaggcgatccagcttcacccgctggtctgctcggccttcaacgcc
gacttcgacggtgaccagatggccgtccacgtgccgctttcgctggaagcccagctcgaa
gcgcgcgtgctgatgatgtcgaccaacaacatcctctcgcccgccaacggcaagcccatc
atcgtgccttcgcaggatatggtcctgggtctctactacctctcgatggagcggcaggag
aagacgcccgaatatatcgaagagaaggacggcaccaagatcgagaagctgccgcgcttt
gccgacatggccgaagtgcaccaggcgctggagaccaagtcggtcacgctgcacacccgc
atcatcgcccgcgtcccgcaggccgatgaagacggcaagccggagatgaagcgcttcgtc
acgacgccgggccgcatgctgatcggcgagtgcctgccgaagaaccacaaggttccctac
gacatcgtcaaccgactcctcaccaagaaggaaatcggcgacgtcatcgaccaggtctat
cgccacaccggccagaaggacacggtgctgttcgccgacgccatcatggttctcggtttc
cgccacgcgttcaaggccggcatcagcttcggcaaggacgacatgatcattcccgacagc
aaggaaggtatgatcgaggacaccaagaagcaggtcgccgattacgagcagcagtatcag
gacggcctgatcacgcagcaggagaagtacaacaaggtgatcgacgcctggagccgttgc
ggcgaccaggtcgccgaggccatgatggacgagatcaaatcgcagaagttcgacaaggac
ggcaaagagtccgagatcaactcgatctacatgatgagccactccggtgcgcgtggttcg
ccagcgcagatgaagcagctcgccggtatgcgcggcctcatggccaagccgtcgggcgag
atcatcgagaacccgatcatctcgaacttcaaggaaggcctgaccgtccttgaatacttc
aactcgactcacggcgcgcgcaagggcctcgccgataccgcattgaagaccgccaactcg
ggctacctgacccgccgcctcgtcgacgtgtcgcaggactgcgtcatcgtcgaggaagac
tgcaagaccgacaacgcgctggaaatgcgcgcgatcgtgcagggtggttcggtgatcgct
tcgctcggcgagcgtatcctcggccgcacgctggtcgacgacctcgtcaacgccaagacc
gacgaagtcatcgtcaaggccggcacgctgctggacgagcccatggtgaaggccatcgag
gaagccgaagtgcaggtcgccaggattcgtagcccgctggtctgcgaagccgaccagggc
gtgtgcgccacctgctacggccgcgatctggctcgcggtacgccggtgaacatcggtgag
gccgtcggcgtgatcgccgcgcagtccatcggcgagccgggcacgcagctgacgatgcgg
accttccacatcggcggtgcggcgcagctcaacgagacgagccacctcgaatcgatctcg
gacggcaaggtcgaatatcgcgacatgccgaccatcaccgacaagaagggtcgtatcctg
tcgctcgcccgcaacggcgaactggcggtgatcgatgccgagggccgcgaacgtgaaatc
cacaaggtgccctacggtaccgtgctgatgcacaaggacggtgccaaggtgaaggaaggc
gatcgcttggccgagtgggacccgttctcgctgccgatcatcaccgagcaatcgggtgtc
gtgaaataccaggacctgatcgaaggcacgacgctggaagagcagaccgacgatgctacc
gggatcgcccagcgtgtcgttaccgagaaccgggcgaccggtcgcaagaagaaggaagac
ctgcgtccgcgtctcaccctgctcagcgaaggccagagcgaggacgagaccgaagcgcag
cgttacctgcttgctccgggaacgacgctctcggttacggacggccagaccgtcgaagcc
ggcgacatcctcgcccgtgcttcgcgcgaagccgccaagacccgcgacatcaccggcggt
ctgccgcgcgtggccgaactgttcgaggcccgcgtgccgaaggacaatgcggtcatcgcc
aagatttccggcaagatcgagttcgttcgcgagtacaaggccaagcgcaagatcgcgatc
gttcccgaagaaggcgaagcagtcgattacctgatccccaagaccaaggtgatcgacgtg
caggaaggcgatttcgtgaagaagggcgacaccctgatctcgggctcgcccaacccgcat
gacatcctggatgttctcggcgttgaagcgctggcggaatatctctgcaccgagattcag
gaagtctaccgactgcagggcgtgaagatcaacgacaagcacatcgaggtgatcgttcgc
cagatgctgcagaaggtcgagatcaccgatggcggcgacaccgtgctgctgccgggcgaa
caggtcgatcgcgacgaaatggacgaggccaatgccaagctcggcaggggcaagaagcca
gccaccggcaacccggtactgctcggcatcaccaaggcctcgctccagacgcgttcgttc
atctcggcggcgtcgttccaagagaccacccgcgtcctcacccaggcttcggtcgagggc
aagaaggacacgctgatcggtctcaaggagaacgtgatcgtcggtcgcctgatcccggcc
ggtaccggcgccggcatgaaccggatgcgcgtcaccgcctcggcccgcgacgctgcgctc
cgtgcgcagtggaagaagcagcaggaaaaactcgctgctgccgacgaagctgcaatggca
gccgagaaggagccggaagccgaagtgatggatgccgacgcgatggctgccgccatgggc
ggagacagcgccggtggcgataccaagccggaagcgcccgaagccagcgaagagtaa
DBGET
integrated database retrieval system
