Eubacterium limosum: B2M23_07370
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Entry
B2M23_07370 CDS
T06653
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
elim
Eubacterium limosum
Pathway
elim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B2M23_07370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elim03019
]
B2M23_07370
03009 Ribosome biogenesis [BR:
elim03009
]
B2M23_07370
Enzymes [BR:
elim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B2M23_07370
Messenger RNA biogenesis [BR:
elim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B2M23_07370
Ribosome biogenesis [BR:
elim03009
]
Prokaryotic type
rRNA helicases
B2M23_07370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
ARD65371
UniProt:
A0AAC9QTJ7
LinkDB
All DBs
Position
1601290..1602933
Genome browser
AA seq
547 aa
AA seq
DB search
MKFRELEINEQLLRAIDDMGFVDMTEIQERAIPRLMEGGDLIGKSQTGTGKTMAFAIPAI
EKIDPELRKPQVLVLLPTRELALQVSEEFRKVLKYSHSIKVVAVFGGASIENQIRDLKSG
AQIVVGTPGRVMDHMRRKTLKFNALTMAVLDEADEMLNMGFREDIELILDAVDHDVQTVL
FSATMPKPILKIAETYQKNPTMIEISPKTMVAPSIEQKYFNISDQNKFEALTRLLDVYKP
QRSLIFCNTKHYVDEITENLQELGYSVDKIHGDMRQVSRLNVLKRFSQGRLKILVATDVA
ARGIDVDDVDIVFNYDVPDNEEYYVHRIGRTGRAGKSGLSLTLARSRDQFKLRKITDYTK
KSIERDLIPTSEVINDIKIAHFKERFKLKAEKGELERYIAIIQELEEKGYEAEFIAAVLL
QAQLPLSDAEDLNTEFKKRGRREGRRERDGKRRREVKGSKGKSFGPEKTKRLFISVGEKD
KVQKRDILGAICGECNIASSAVGNIDMYNKFTFVDVDVDVAKKVEKKLNGKMIKDNKVKV
EISKKKK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagagaactagagattaacgagcaattgctcagggcaattgatgatatggga
tttgttgatatgacagaaattcaggaacgcgcaattccccgtttgatggaaggcggcgac
cttattggtaaatcccagacaggaacaggaaagactatggcctttgcgattcctgccata
gagaagattgatccagaactcagaaaaccgcaagtgctggtgttgctgccgacacgtgag
ctggcgctgcaggtttctgaagaattcagaaaggttttaaaatacagccacagcattaaa
gttgttgcagtgtttggcggcgcttcaattgaaaaccagattcgtgatctgaaatccgga
gcacagattgtagtaggcacaccaggacgtgtcatggaccatatgcgtcggaaaacttta
aaattcaacgcacttacaatggcagtgctggacgaggcggatgaaatgctgaatatgggc
ttcagagaggatattgagctcattttagatgcggtagaccatgatgttcagaccgtttta
ttttcggctacaatgccaaaacccattttaaagatagcggaaacctaccagaaaaatccg
acaatgattgaaatttcgcctaaaacaatggtagcgccaagtattgagcagaagtatttt
aatatttctgaccagaataagtttgaagctttaacccgtttattggatgtctataaacct
caacgctcacttattttctgcaacaccaaacactatgttgacgaaattactgaaaatctg
caggaactggggtattccgtagacaaaattcatggcgatatgcgccaggtatctagactc
aatgtcttaaaacgctttagccaggggcggctgaaaattttagtagccaccgatgtagcg
gccagagggattgatgttgacgatgtggatattgtttttaactacgatgtaccagacaac
gaagaatactatgtacaccgtattggccgtaccggacgtgcggggaagagcggtctttca
ctgacacttgcccgttcaagggatcagtttaaactgcgaaaaataaccgattataccaag
aaaagcatcgaacgcgatttaattccgaccagtgaggtgatcaatgatattaagatcgcc
catttcaaggaacgttttaagctcaaagccgaaaagggagaactggaacgttacattgcg
atcattcaagaacttgaagaaaagggctacgaagcagaatttatcgctgcggttctttta
caggcgcagcttcctttgtcagatgcggaagatttaaatactgagtttaaaaaacgcggg
cgccgtgaaggcagacgtgaaagagatggaaagcgccgcagagaagtaaagggcagtaaa
ggaaaatcctttggcccagaaaagacaaaacgtctttttatcagtgttggtgagaaagac
aaagtgcagaaaagagatattctcggcgctatttgcggcgagtgtaatattgcgtcttcg
gcagttggaaatattgatatgtataataaatttacctttgtggatgtggatgtggatgtc
gccaaaaaagtagaaaaaaaactgaatggtaaaatgatcaaagataacaaagtaaaagtt
gaaatttccaaaaagaaaaaataa
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