Eubacterium limosum: B2M23_13645
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Entry
B2M23_13645 CDS
T06653
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
elim
Eubacterium limosum
Pathway
elim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B2M23_13645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elim03019
]
B2M23_13645
Messenger RNA biogenesis [BR:
elim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B2M23_13645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Fez1
KH_2
DUF7669
DUF5662
Motif
Other DBs
NCBI-ProteinID:
ARD67979
UniProt:
A0AAC9W5I5
LinkDB
All DBs
Position
2918966..2920501
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AA seq
511 aa
AA seq
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MDILTICLIVGIVIAFGVGYFIRKNVAEGKINSAEETAKKIVNDAVKEGEAQKKEMLFNA
KEESLALKEAIEKDNRERRAELQKTENRLIQKEENLDKKAANLERNEDKLERKNKELDKK
QEKLDSLYEEQVKELERISGMTFEEAKQILLDDVAKETRAEAAVMIRQIEAESKATADKK
AKELIAQSIQRCAADHVAENTITVVNLPNDEMKGRIIGREGRNIRTLETLTGIDLIIDDT
PEAVILSGFDPIRREVARLSLEKLIIDGRIHPARIEEIVKKSQKEMDAQIKEVGEQACFD
TGIHGLHPEVVKLLGRLKYRTSYGQNVLKHSIEVAHLAGLMAAELDANVKIAKRAGLLHD
IGKAIDHEVEGNHVEIGVNLLKKYKENKNVIHAVEAHHGDVEATTIEAVLVQAADAISAA
RPGARRETLVSYVQRLEELEKIATSFDGVEKSFAIQAGREVRIMVKPDSVNDDDMMMLSR
DIAKKIESEMEYPGNIKVNVIRETRAVEYAK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atagacatattaactatatgcttaatcgttggtatagtcattgcctttggcgttgggtat
tttatccgaaaaaacgttgctgagggcaagataaatagtgctgaagaaacagccaagaaa
atcgtaaacgatgcagtcaaagagggcgaagcccaaaagaaggaaatgctgtttaacgcc
aaggaggaatccttagctttaaaggaagccattgaaaaagataaccgcgagagacgcgcc
gagctccagaaaacggaaaaccgtttgatccagaaggaagaaaacctggataagaaagcg
gcgaatctcgagcgcaatgaggacaagctcgaaagaaaaaacaaagagcttgataagaaa
caggaaaaactggacagcctctatgaagaacaggtcaaggaactggaacgtatttcaggc
atgacctttgaggaagcaaaacagattttactggatgatgttgccaaggaaacccgcgcc
gaagcggcggtaatgatccgccagatcgaggcagaatccaaagcgacagcagacaaaaag
gccaaagagctgatcgcgcagtccattcaacgctgtgcggcagaccatgtggcagaaaat
accattaccgtggtcaacctgccaaatgatgaaatgaaaggccgtattattggccgtgaa
ggccgtaacattcgtacactggaaaccttgacgggcatagacctgatcattgatgatacg
ccggaagccgttattctttccggttttgatccgatccggcgtgaagtagcccgtttgtca
ctggaaaaactgattattgacggacgaatccatccagcaagaattgaagagattgtaaaa
aaatctcaaaaagaaatggatgctcagatcaaggaagttggagaacaagcctgttttgac
acaggtatccacggattacatcccgaagttgtcaagctgttaggacgtctgaaataccgt
accagctacggccagaacgtgctcaagcattccattgaggttgcccacctggcaggtctg
atggccgctgagctggacgccaacgttaaaattgcaaaacgcgcaggtttgctgcacgat
atcggtaaagccatcgaccatgaggttgaaggaaaccatgtcgaaatcggcgtaaacctg
ttaaagaaatacaaggaaaacaaaaatgtgatccacgcggtagaggcccatcacggcgat
gtggaagccacaaccattgaggctgtgcttgtacaggctgctgacgccatctcggccgca
agacccggcgccaggagagaaacacttgtctcctacgtgcagcggctggaagagctggaa
aaaatcgccacctcctttgatggtgtcgaaaaatcttttgcaatccaggctgggcgtgaa
gtgcgcataatggtcaagccagattctgtcaacgacgatgatatgatgatgctgtctcgt
gatattgccaagaagattgaatctgaaatggaatatccagggaatatcaaggtcaacgtc
atccgagaaaccagagccgtagagtatgctaaatga
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