Eubacterium limosum: B2M23_14060
Help
Entry
B2M23_14060 CDS
T06653
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
elim
Eubacterium limosum
Pathway
elim03030
DNA replication
elim03430
Mismatch repair
elim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B2M23_14060
03430 Mismatch repair
B2M23_14060
03440 Homologous recombination
B2M23_14060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elim03032
]
B2M23_14060
03400 DNA repair and recombination proteins [BR:
elim03400
]
B2M23_14060
Enzymes [BR:
elim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B2M23_14060
DNA replication proteins [BR:
elim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B2M23_14060
DNA repair and recombination proteins [BR:
elim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B2M23_14060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
GHL6
Motif
Other DBs
NCBI-ProteinID:
ARD66590
UniProt:
A0AAC9QVN2
LinkDB
All DBs
Position
3013340..3016858
Genome browser
AA seq
1172 aa
AA seq
DB search
MESEFTHLHVHSEFSLLDGFGRIKQLVKEAKDLEMKSLALTDHGVLFGAVDFYKACLEEG
IKPLIGCEVYVSPRRLDQKEGNIDTNPYHLVLLAENNDGYKNLMKVVSEGFIDGFYYKPR
VDHEYLRKHHEGIICLSACIGGEIPRLIIEGQLQKANEICQMYQDIFGKGNFFLEIQDHR
MQKEAQVNEVLIDFSKKYDIPLVATNDVHYVRKADAEAHDILLCIQTAASVDDEERMRFP
NNEFYLKSPDEMSRLFIDVPEAIENTNKIAERCNVSFDLESAHLPEFELPEGEPSAGGYL
RKLCEAGLKARYQEITPEIKERMDYELDVIHSMGFDNYFLVVWDFIKYAKDHDIMVGPGR
GSAAGSLVAYGLDITTLDPLKYNLLFERFLNPERITMPDIDCDFCYERRQEVIDYVIRKY
GADHVAQIITFGTMAARGAVRDVGRALNMPYNAVDKVAKEIPMHPGQNITIERALEENSE
LRKMKENDPEVSKLLDMAESMEGLARHASTHAAGVVISDKPLMEYVPLYRNGDMITTQFP
MGLLEDLGLIKMDFLGLRTLTVIRDALENIKHSQGMNINLDNIDLEDPKVYKMLSKGDTL
GVFQLESKGMIAFMRDLQPEHFEDIIAGISLYRPGPMDQIPRYIENKKSPEAITYLHPIL
EPILDVTYGCMVYQEQVMQIFRDVAGFTMGRSDLVRRAMSKKKIDVMNQEGEVFIHGEVD
ENGETVIDGAVRRGVPENVAEQIYAEMKDFAKYAFNKSHAAAYAVIAYQTAWLKCYYPTE
FMAALMSSVMDDEKKVSKYIEDCRKNDIKVLPPDVNVSYDKFSVKNNKICFGLGAIKGLG
KNAIVSIVNARETDGAFKGFRDFCEKVDLKALNKRMVEGLIKSGAFDYTGSTRAQLLLGA
ERMVDQVQREKRDRLAGQISLLDFGGNSSLKEDFLPDVAPFTKEQRLALEKEVLGLYVTG
HPLEKYENTLKEKTNLNSSMLDSYEDLRDSGIRDGGAVIIGGLIDDVKNQITRNGKLMAF
MTLEDLYGRLEVVVFPNTLEKYRPLLTVDHAVIVRGKINYNEEMNVSVICEQVYPLSLKT
DIPQVKEERTAYAPAEKKEKLVIHFTDFTQKPLLKEIKSVLMKTPGPVPVELHFEKEHKK
FGADKNLWVSVCDELINNLEAILGQNKVEVLK
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atcgaatctgaatttacacatttacatgtccacagtgaatttagccttttagatggtttt
ggaagaattaagcagctcgtgaaagaagcaaaggatttggaaatgaaaagtctcgcgctt
acagaccacggggtgctttttggcgcggtcgatttttacaaagcatgcctggaggaaggc
atcaagccgcttatcggctgcgaggtttatgtttctccccgccgtcttgaccaaaaggaa
ggtaatattgacaccaatccatatcatctggtgctgctggccgaaaacaacgatggctat
aaaaatctgatgaaagtcgtatctgaaggctttattgatggattttactataaacccagg
gttgaccatgaatatttaagaaagcaccatgaaggcattatttgtctgtcggcctgcatt
ggcggggaaattccaagactgatcattgaaggacagctgcagaaagcaaatgaaatctgt
cagatgtatcaggatatttttggaaagggaaattttttccttgaaatacaggatcaccgt
atgcagaaggaagcgcaggtcaatgaggtgctcattgacttttctaaaaaatatgacatt
cctctggtagcgaccaatgatgtccattatgtccggaaagcggatgccgaagcccacgat
atattgctgtgtattcagacagcggcttctgtggacgatgaggagcggatgcggtttcca
aataatgaattttatctgaaatccccagatgaaatgtcccggttattcattgatgtgccg
gaggccattgagaataccaacaaaattgccgagcgctgcaacgtgagttttgaccttgaa
agcgcccatttgcctgagtttgaacttccagagggagaaccctctgcgggtggttacctg
agaaagctttgtgaagcaggacttaaggcccggtatcaggagattacgccagaaataaag
gaacgcatggactatgagctggatgtgatccattccatgggctttgacaattatttcctg
gttgtctgggattttattaaatacgccaaggatcatgacatcatggtcggaccaggccgt
gggtccgccgcgggaagccttgtggcctatgggctggatatcacgacactggatcccctc
aaatacaacctgctgtttgagcggtttttaaaccctgaacgaatcacgatgcccgatatc
gattgtgatttctgctatgaacgaagacaggaagtcattgattacgtgatcagaaaatat
ggcgcagaccatgtggcgcagattattacctttggtaccatggcggcaagaggtgcagtg
cgtgatgtgggaagagctttgaatatgccctacaatgcggtggataaggtagccaaagaa
attccgatgcacccagggcagaatattacgattgaaagggctctggaagaaaacagcgag
cttcggaagatgaaggaaaacgatccggaggtttccaagcttctggatatggccgaatcc
atggagggtctggcacgtcatgcctccacccatgcggctggtgtggttatttcagataag
ccgctgatggagtatgttccgctttacaggaacggagacatgattaccacccagtttccc
atgggactcttggaagacctcgggcttataaagatggatttcctgggtttgagaaccttg
acggttatacgggacgcccttgaaaatataaaacacagccaggggatgaacatcaattta
gacaacattgatctcgaagaccccaaggtttataagatgctgtccaagggagacaccctt
ggggtatttcagcttgagagcaaagggatgatcgcttttatgagagatctgcagccagag
catttcgaggacatcattgccggaatctcgctttaccgccctggtccgatggatcagatc
cccagatatattgagaataaaaaaagtccggaagccattacctatcttcatccgattttg
gaaccaattctggatgttacttatggatgtatggtttaccaggaacaggttatgcagata
ttcagggatgtggcaggctttaccatgggcagaagtgacctggtccgccgtgccatgtcg
aaaaagaaaattgatgtcatgaatcaggaaggtgaagtttttatccacggcgaggtggat
gaaaacggcgagaccgtcattgacggcgcggtacgccggggcgtgccggaaaatgtggca
gaacagatatacgcggaaatgaaggattttgccaaatacgcctttaacaaatcacatgcc
gctgcatacgcggttatcgcctaccagactgcctggctcaaatgctattatccgacagaa
tttatggcggcgttaatgtcctctgtgatggacgatgaaaaaaaggtatctaaatatatt
gaggactgccgtaaaaatgacatcaaggtgctgccgccggatgtgaatgtcagctatgac
aagttttctgtaaaaaacaataagatctgttttggcttaggggccattaagggacttggg
aaaaatgccattgtgtccattgtaaatgccagagagaccgatggcgctttcaaaggcttt
cgggatttctgtgagaaagtcgatttaaaggctttgaataaacgcatggtggaaggcctg
atcaaaagcggcgcctttgactataccggaagtacccgcgcccagcttttacttggtgca
gagcggatggtggatcaggtgcagcgtgagaagcgtgaccgccttgccggccagatatcc
ttgctggattttggcggaaacagcagcctgaaggaggactttttacccgatgtcgcaccc
tttaccaaggaacagcggctggcgctggagaaagaggtgctcggcctgtatgttacgggg
catccccttgaaaaatatgagaataccttaaaagaaaagacaaaccttaacagcagtatg
cttgacagctacgaggacctgagggattctgggatcagggacggcggcgcggtaatcatt
ggcggactcattgatgatgtcaaaaaccagatcacccgcaatggcaagctgatggctttc
atgacactggaggatttatacggccgcctggaggtggttgtattccccaatacattggaa
aaataccgtcctcttctgaccgtggaccacgcggtgattgtgagaggtaagataaattat
aatgaagaaatgaatgtttctgtaatctgtgagcaggtctatcctctcagccttaaaacg
gatattccgcaggtgaaagaggaaagaacagcgtatgcgccggctgaaaagaaggagaag
ctggtcattcattttacagattttacacaaaagcccttgctaaaagagattaaatccgtt
ttaatgaaaacaccgggtccggtaccggtggagctgcattttgaaaaggaacataaaaaa
tttggcgcagataaaaacctgtgggtaagcgtctgtgatgaattaataaataacctggaa
gcaattctagggcagaataaagtggaggtactcaaatga
DBGET
integrated database retrieval system
