Eubacterium limosum: B2M23_17100
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Entry
B2M23_17100 CDS
T06653
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
elim
Eubacterium limosum
Pathway
elim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B2M23_17100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elim03019
]
B2M23_17100
03016 Transfer RNA biogenesis [BR:
elim03016
]
B2M23_17100
Enzymes [BR:
elim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B2M23_17100
Messenger RNA biogenesis [BR:
elim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B2M23_17100
Transfer RNA biogenesis [BR:
elim03016
]
Prokaryotic type
tRNA degradation factors
B2M23_17100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
GcvP2_C
PCB_OB
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ARD67147
UniProt:
A0AAC9QWQ6
LinkDB
All DBs
Position
3654988..3657066
Genome browser
AA seq
692 aa
AA seq
DB search
MRIFETEIAGRPFSVEIGEVAQLAKGSAMIRYGETSVLAIAAASKKPREGMDFFPLSVDY
EEKQYAVGKIPGGFLKREGRPSEKAILNSRLIDRPIRPLFPKGFRNDVQVVTTVMSVEQD
NAPEIAAMIGASIALSISDIPFDGPTGSVAVGLIDGEFILNPTEAQREVSDLSLTVAGTK
DAIMMVEAGANEVSEETMLEAILFAHEEIKKIVAFQEEIVAAVGVEKKDYTLYLPTDELT
AEVEAFVGRKMHEAVHTEDKTERLENIDAVKTEVVEHFGELYPEQLNDIDTILTALQKKE
VRSLILVDRIRPDNRKMDEVRPITAKIDYIPRVHGSGLFTRGETQVLSIATLGVLRDAQV
LDGLSNDTEKRYMHQYNFPGYSVGEARPMRSPGRREIGHGALAERALLPMIPPEEEFPYA
IRVVSEVLSSNGSTSQASVCGSSLALMAAGVPLKKPVAGVAMGLIKEDEKLAILTDIQGM
EDFLGDMDFKVAGTKDGITAIQMDIKIHGIDREILTQALEQARIGRMHILGIMNEEISEP
RAELSPYAPRIMTMTINPDKIRDVIGSGGKVINKIIEETGVKIDIEDDGTIYIASEDGVA
ADKAKAIIEDIVKEVEVGEVYTGEVVRIMNFGAFVSLPGGKDGLIHISKLAKERVKSVED
VVKLGDVVTVKVVEIDDKGRINLSRKACLPKD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagaatatttgaaacagaaattgccggtcgcccttttagcgtggaaatcggcgaggtt
gcacagcttgctaagggctctgcaatgatccgctatggtgaaaccagtgttctggccata
gccgctgcatctaaaaaaccccgtgaaggcatggatttttttccgctgagcgtggattat
gaagaaaaacaatacgcggttggtaagataccgggtggctttttaaaaagagaaggccgt
ccttctgaaaaagcaattttaaactcacgtttaattgaccgcccaattcgtccgctgttc
cccaagggattccgcaatgatgtccaggtggtcactacggttatgtctgttgagcaggat
aacgcaccggaaatcgccgcaatgatcggcgcgtccattgccctcagcatttcagacatt
ccttttgacggtcctaccggttcagtagctgtcggcctgatcgacggtgaatttattctg
aacccaacagaagcccagcgcgaagtcagcgatttaagcctgaccgttgccggtaccaag
gacgccatcatgatggtagaagctggcgccaacgaagtttctgaagaaaccatgctggaa
gcgattttattcgcgcatgaagaaattaagaaaatcgtggctttccaggaagagatcgtc
gcagccgtcggcgtggaaaagaaggattatactctttatctgccaacagacgagctgacc
gcagaggtagaagcttttgtgggccgtaaaatgcatgaagccgttcacactgaagataaa
acagaacgtcttgaaaatattgatgcggttaagactgaagttgttgaacattttggcgag
ctttatcctgaacagttaaatgatattgatacaattttaactgctctgcagaaaaaagaa
gtccgcagtttgattctggtagaccgtatccgtcccgataaccgtaagatggatgaagtt
cgtccgatcactgcaaaaatcgattatatcccgagagttcatggttctggccttttcacc
agaggggaaacccaggtgctttccatcgctactttaggtgtcctgagggatgctcaggtg
ctggatggcttatccaacgatacggaaaaacgctatatgcatcagtataatttcccaggc
tacagtgttggcgaagcaagaccaatgagaagcccgggccgccgcgaaatcggccacggc
gcactggcagagcgcgcgctgctgccaatgattcctccggaagaagaattcccctatgct
atccgtgtcgtatctgaggttttaagttcaaacggttcgacctctcaggccagcgtatgc
ggcagcagtcttgctctgatggcagcgggtgtaccgcttaagaagccggttgcaggtgtg
gcaatggggctgatcaaggaagatgaaaagctggcgattttaacagatatccagggtatg
gaagacttccttggggacatggattttaaggttgccggtactaaagacggaatcaccgcg
attcagatggatatcaagatccacggtatcgacagagagattttaacccaggcactggaa
caggcccgcattggccgcatgcatattctgggtatcatgaatgaagaaatttctgaacca
cgcgctgagttatcaccatacgcaccgcgtattatgaccatgaccattaaccctgacaag
attcgtgacgttatcggatcaggcggaaaggtcatcaataagattattgaggaaaccggc
gttaagattgatattgaggacgatggcaccatctatatcgcttctgaagacggtgttgcc
gcagataaagcgaaggcgattattgaagatatcgtcaaggaagtggaagtcggagaggtt
tatacaggcgaggttgttcggattatgaacttcggtgctttcgtatccttgccaggtggt
aaagacggcctgatccatatttcaaagcttgccaaggaacgcgtgaaatccgtagaggat
gttgtaaagcttggtgatgtcgtaaccgtcaaggttgttgaaattgacgataagggccgc
atcaatttatcaagaaaagcgtgcttacctaaggattga
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