Elioraea tepida: KO353_01550
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Entry
KO353_01550 CDS
T07340
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
elio
Elioraea tepida
Brite
KEGG Orthology (KO) [BR:
elio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elio03032
]
KO353_01550 (topA)
03400 DNA repair and recombination proteins [BR:
elio03400
]
KO353_01550 (topA)
Enzymes [BR:
elio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KO353_01550 (topA)
DNA replication proteins [BR:
elio03032
]
Prokaryotic type
DNA Topoisomerases
KO353_01550 (topA)
DNA repair and recombination proteins [BR:
elio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KO353_01550 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QXM24973
UniProt:
A0A975U3B4
LinkDB
All DBs
Position
complement(320920..323559)
Genome browser
AA seq
879 aa
AA seq
DB search
MDVVVVESPAKAKTINTYLGRDFTVVASYGHVRDLPARDGSVRPEEGFAMDWEADERGEK
QLRAIAAALKGAKRLYLATDPDREGEAISWHVREMLAARRALKGIEVRRITFNEITRKAV
KAALEHPRDLDADLIDAYLARRALDYLFGFTLSPVLWRKLPGSRSAGRVQSVALRLICER
EAEIEAFRPREYWTIEGAFLTERAAPFTARLASLDGRKLGQFDIPDEAAARAIVSRVEAA
RWRIAKVETKRVRRNPPPPFTTSTLQQEAARKLGFSATRTMRTAQQLYEGVEIERETVGL
ITYMRTDGVQMAAEAVAAIRAHVAATSGRDYLPDTPRLYTSRAKNAQEAHEAIRPTDVTR
TPEAVAHALTDDQRRLYELIWKRAVASQMASAELDQTAVDIASEDGRIGFRATGSVIVFD
GFLKLYREDRDEAPGPESEDEDGRLLPPMAERERSQLKSVTPLQHFTQPPPRYTEASLVK
KLEELGIGRPSTYASILQVLQDRQYVRLEARRFVPEDRGRLVTAFLVGFFEHYVAYDFTA
ALEEQLDDISGGRAAWREVLGAFWRDFVKAVESTKELRISDVAEALDRELGPHLFPDRPD
GSDPRACPRCGTGRLGLRIGGATGAFIGCSNYPECRYTRNVGGNPAAGADDVRVLGRDPE
TGELVTLRPGPYGPYVQLGEAPPAEAYASEGRRGAKKGAKGKGGPKPKRASLPKGMDPAS
VTLETALGLLSLPRLVGIHPERQEPIYAGIGQFGPYVRLGPVYASLERDDDVLSIGLNRA
VVLLAKKLDSVKLLGTHPKGGEVTLRRGRFGPYVQHGTLVANLPKGMAIEEVGLDEAVSL
LAEKGKPLAGGGGRSKATSARPAAAKPAGRRPARRATAG
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgtcgtcgtcgaatcaccggccaaggccaagacgatcaacacttatcttggt
cgcgacttcaccgttgtcgcctcctacggccatgtccgcgacctccccgcacgggacggc
tcggtccgccccgaggaggggttcgcgatggactgggaggcggacgagcggggcgagaaa
cagcttcgcgccatcgcagccgcgttgaaaggagccaaacgcctctacctcgccaccgac
cccgaccgggagggggaggcgatctcctggcatgtgcgcgagatgctcgccgcacgccgt
gcgctgaaaggcatcgaggtgcggcggatcaccttcaacgagatcacgcgcaaggcggtg
aaggcggcgctcgagcatccgcgcgatctcgatgccgacctgatcgacgcctacctcgcc
cgccgggcgctcgactatctcttcggcttcaccctctcgccggtgctctggcgcaagctt
cccggaagccggagcgcgggccgcgtccagtcggtcgcgctcaggctgatctgcgagcgg
gaggcggagatcgaggccttccgcccgcgcgagtactggacgatcgagggcgccttcctt
accgagcgcgcggctccgttcacagcgcgcctcgcctccctcgacggtcggaagctcggc
cagttcgacattcccgacgaggccgccgcgcgggcgatcgtgtcgcgggtcgaggcggcg
cgctggcgcatcgccaaggtcgagacgaaacgggtccggcgcaacccgcccccgcccttc
accacctcgacactgcagcaggaggccgcccgcaagctcggcttctccgccacccgcacg
atgcggaccgcacagcaactctacgaaggcgtcgagatcgagcgagaaaccgttggtctc
attacatatatgcgaaccgatggggttcagatggcggctgaagcggtggccgcgatccgc
gcccatgtcgccgctacctcgggccgtgattacctccccgacaccccgcggctctatacc
tcccgtgcgaagaatgcccaggaagcccatgaggccattcgcccgaccgacgtcacccga
acgcccgaggcggtggcccacgctctcaccgacgaccagcggcggctctatgagctgatc
tggaagcgggccgtggcgagccagatggcctcggccgagctcgaccagacggcggtggac
atcgcctccgaggatggtcggatcggttttcgcgcaaccggctccgtcatcgtcttcgat
gggtttctcaagctctaccgggaggaccgtgacgaagcgccggggcccgagtccgaggac
gaggacgggcgcctcttgccgcccatggcggagagagaacggtcgcagctgaagtcggtc
acgcctctgcagcacttcacccagccgccgccgcgctacaccgaggcgtcgctcgtgaag
aagctcgaggagctcggaatcggccggccgtccacctacgcgtcgatcctgcaggtgctg
caggatcgccagtatgtccggctcgaggcgcgacgcttcgtgccggaggatcgcggacgg
ctcgtcaccgccttcctcgtcggcttcttcgagcactatgtggcctatgacttcaccgcc
gccctcgaggagcagctcgatgacatctctggcggccgcgctgcctggcgagaggtcctc
ggcgcgttctggcgcgacttcgtcaaggccgtcgagagcaccaaggagctcaggatctcc
gacgtcgccgaggcgctcgaccgcgaactcggcccgcatctcttccccgaccggcccgac
gggtccgacccgcgtgcctgcccgcgctgcggcaccggtcgtctcgggctgcggatcggc
ggcgcgaccggggcgttcatcggctgctcgaactatcccgagtgccgctacacccggaac
gtcggcggcaacccggccgcgggggcagacgatgttcgggtgctcggccgcgatccggag
acgggggagcttgtgacgctccggccggggccatacggcccctatgtccagctcggcgag
gccccgcccgccgaggcttacgcatcggaagggcggaggggcgcgaagaagggggcgaag
ggcaagggtgggccgaagccgaagcgcgcctcgctgccgaaggggatggaccctgcctcg
gtgacgctcgagacggcgctcggcctgttgtccctgccgcggctcgtgggcatccacccc
gaacggcaggagccgatctatgccgggatcggccagttcgggccctatgtcaggctcggt
cccgtctacgccagtctcgagcgtgacgatgacgtgctcagcattgggctcaatcgcgcg
gtcgtgctgctcgcgaagaagctcgacagcgtgaagctgctcggcacccatccgaagggc
ggcgaggtgacgcttcgccgcggccgcttcggcccctatgtccaacacgggacgctggtg
gcgaaccttccgaaagggatggcgatcgaggaggtcgggctcgacgaagccgtgtctctg
ctcgccgagaaaggcaagccgctcgcagggggcggcgggcgcagcaaggcgacgtcggcc
aggcccgcggccgcgaagccggcgggtcgccggccggcgcgccgcgccacggcggggtga
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