Enterovibrio litoreus: AB8599_01675
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Entry
AB8599_01675 CDS
T11507
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
elit Enterovibrio litoreus
Brite
KEGG Orthology (KO) [BR:
elit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elit03021
]
AB8599_01675 (rapA)
Transcription machinery [BR:
elit03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AB8599_01675 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
NAT10_TcmA_helicase
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
XKY36721
LinkDB
All DBs
Position
I:complement(358177..361095)
Genome browser
AA seq
972 aa
AA seq
DB search
MPYALGQRWISDTESDLGLGTVVAIDARTVTLMFPASEENRLYARSDAPITRVMFNVGDS
IESHEGWFLQVEHVDEEQGILTYTGQRSDTGEDNVQLREIFLSHQIRFNKPQDKLFAGQI
DRMDRFALRYRALKNQYEQHKSPMRGLCGMRAGLIPHQLFIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRASRVLIVVPETLQHQWLVEMLRRFNLHFSVFDEERCVEAFA
DADNPFDTAQLVLCSLDFLRKSRKRAEQAAEGEWDLMVVDEAHHLEWSEEKPSREYQVIE
AIAENTPAVLLLTATPEQLGHESHFARLRLLDPDRFYDYQAFVKEEQQYAPVADAVSQLL
SNETLTNDAKNSITELLSEQDVEPLLRIIEANDIDDNQRRDARNELIDNLMDRHGTGRVL
FRNTRAAIQGFPQRHLNLYPLALPSQYQTSMRVAGIMSSGNQSLEQKAIQWLYPEDIYQQ
FEGENATWWGFDPRIDWLLDLLKSNRQEKVLVICSRAQTALSLEQALREREGIRGTVFHE
GMSILERDKAAAYFAQDEAGAQVLICSEIGSEGRNFQFANQLVMFDLPMNPDLLEQRIGR
LDRIGQQRDIEIHVPFMIGTSQALLARWYNEGLNAFEETCPTGRAVFEHVQDDLLQLLAK
GSIDESLDALVETSAEMHYRLKGEMEKGRDRLLEMHSNGGEQAKALAEKIASLDGDTNLV
TFALGLFDTVGLNQDDKGENAIVVTPSEHMLVSSYPGLPEEGCTITFDRETALSREDMRF
ISWEHPMIQGGIDLLLSEDVGTTAVSLLKNKALPVGTLFLELLYVADAQAPKNSGIHQFL
PAAPIRVLLDAKGNDLAAQVEFEGFNRQLSPVNRHLGSKLVSSVQTQIHGLIEMGTPIAQ
THLVSVKESAEAEMTTKLRSELDRLQALKAVNPNIRDDELESLETQMSDLRTYISQAQVR
LDALRVIVVSHQ
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgccctcggacaacgttggatcagcgatactgaaagtgacctaggtcttggt
actgtggttgctatcgacgcgcgtaccgttaccctaatgttccccgccagcgaagaaaat
cgtttatacgcccgcagcgacgcgccaatcacccgtgtaatgtttaatgtgggtgacagc
attgaaagccacgaaggctggtttttgcaggttgagcacgttgacgaagaacagggaata
ctgacctataccggccaacgctcagacacaggcgaagacaatgttcaacttcgcgaaatt
tttctgagccaccaaattcgctttaataaaccgcaagacaaactgttcgcgggtcaaatc
gaccgaatggatcgctttgcacttcgctatcgcgcgctgaaaaaccaatacgagcagcat
aaaagcccgatgcgtggcctgtgtggtatgcgtgctggtttaatcccacaccaactattc
attgctcatgaagtgggtcgacgtcacgcgccacgtgttttattagccgatgaagtcggt
ctgggtaaaaccatcgaagcaggcatgatcatccaccagcaagtgctgtcgggtcgtgca
tctcgtgtattgatcgtggtgccagaaaccctgcaacaccaatggctggtagaaatgcta
cgtcgcttcaacttacatttttcagtgtttgatgaagagcgctgtgtagaagcgtttgcc
gatgctgataacccgtttgatactgcgcaacttgtactttgctcgctggatttcctgcgc
aaaagccgcaagcgtgcggaacaagcggcagaaggcgaatgggatctgatggttgtggat
gaagcgcaccaccttgagtggagcgaagaaaagccaagccgtgaatatcaggtgattgaa
gccattgcagaaaacacgccagcggtgctgctattgactgcaaccccagagcaattgggc
catgaaagccactttgcacgtctgcgtctgctagacccagatcgtttctatgattaccaa
gcattcgtcaaagaagagcagcaatatgcacccgttgctgatgcggttagtcagttgctg
tctaacgaaacgctgaccaatgatgcaaaaaacagcatcactgagctgctgtctgagcaa
gatgttgagccattgctacgcatcatcgaagccaatgacatcgatgataaccaacgtcgc
gacgcacgtaacgagctgattgataacctgatggatcgccacggcactggccgtgttttg
ttccggaatacccgtgctgctattcaaggattccctcagcgccacctaaatctgtaccca
cttgcgttaccttcacagtatcaaacctcgatgcgcgtggcgggcatcatgagtagcggt
aatcaaagccttgagcagaaagcgattcagtggttgtaccctgaagatatctaccagcag
tttgaaggcgaaaacgccacctggtggggctttgacccgcgcattgattggctgctggat
ctactaaaatctaaccgacaagaaaaagtgctggtgatctgttcacgagcacaaacggcg
ctttcgctagaacaagcactgcgtgagcgtgaaggcattcgtggcaccgttttccacgaa
ggcatgtcgattcttgagcgtgacaaagcggcggcttatttcgcccaagacgaagctggc
gcgcaggtgcttatctgttctgagatcggttcagaaggtcgtaacttccagtttgcaaac
caattggtgatgttcgatttgcccatgaaccctgacttgcttgagcagcgtattggtcgt
ttggaccgtatcggccaacagcgcgatatcgaaatccatgtgcctttcatgattggcacc
tcacaagcactgctggctcgctggtacaacgaaggcctaaacgcctttgaagaaacctgc
ccaaccggtcgtgccgtgtttgagcacgttcaagatgacctgcttcagcttctggcaaaa
ggcagcattgatgagtctctcgatgcactggtcgaaaccagtgccgagatgcattaccgc
ttgaaaggtgaaatggaaaaaggccgtgaccgtctgctggaaatgcactctaacggtggt
gagcaagcgaaagcgttggcagaaaaaattgcctcacttgatggcgacaccaatctagtg
acattcgcattgggtctgtttgatacggttggcctgaaccaagacgacaaaggcgaaaac
gccattgtggtgacgccatcagagcacatgctggtatcaagctatccagggctacctgaa
gaaggctgcaccatcacgtttgatcgcgaaacagcactctcacgtgaagacatgcgcttt
atcagctgggaacacccgatgatccaaggcggcatcgatttactgctgtcagaagatgtc
ggtacgacggcggtttcactgttgaaaaacaaagccctgcctgttgggactttgttcctt
gaactgctgtatgttgctgacgcgcaagcgccgaaaaattcaggcattcatcagttcctt
ccggctgcgccaattcgggtgcttctggacgccaaaggcaatgacttagcagcccaagtg
gaatttgaaggcttcaaccgtcaattaagcccagttaaccgccaccttggcagcaagctt
gtctcttcggttcaaacgcagatccatggattgattgagatgggcaccccgattgcacaa
actcatctggtgtcggtaaaagaaagtgccgaagcggagatgaccaccaagttgcgctcg
gaattggatcgcctacaggctttgaaagcggtaaacccgaacattcgtgatgacgagttg
gaaagcttggaaacacaaatgtcggatttgcgtacctacatcagccaagcgcaagttcgt
cttgatgcgttacgtgtgattgtggttagccaccagtaa
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