Enterovibrio litoreus: AB8599_06810
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Entry
AB8599_06810 CDS
T11507
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
elit Enterovibrio litoreus
Pathway
elit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
elit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AB8599_06810 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elit03400
]
AB8599_06810 (sbcB)
Enzymes [BR:
elit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
AB8599_06810 (sbcB)
DNA repair and recombination proteins [BR:
elit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AB8599_06810 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AB8599_06810 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB8599_06810 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
CfaE_2nd
Motif
Other DBs
NCBI-ProteinID:
XKY37655
LinkDB
All DBs
Position
I:complement(1540280..1541704)
Genome browser
AA seq
474 aa
AA seq
DB search
MAHTNEPTFFFFDYETFGISPALDRPCQFAGVRTDKDFNIIGEPLVIYCQPPNDYLPQPE
ACLITGITPQVAVSRGLPEPEFIAKIHEQLSLPGTCSVGYNNIRFDDEVSRYTLYRNFFD
PYGWSWQNGNSRWDLLDAMRAAFALRPDGIEWPVNAEGFTSFKLEHLSVANGIEHANAHD
AMADVIATIEMAKKFKHAQPRLFDYLYAHRNKNKLTALIDIVAMKPLVHVSGMFGTERGN
TSWVVPVAWHPDNKNAVIAIDLALDPSPLFDLDADALRERLYTKRADLAPDELPAPIKLI
HINKCPVLAEAKTLRPEDAARLGIDRQSCLDNLKKLQAQPQIREKLIELYAEKREYGDSN
NIDAALYDGFFSPSDRSTMDIIRQTKPENLAALEINVADKRIHPLLFRYRARNFSWTLTD
TEQKKWHLHRRDYFETHLPEYMARLEDLVEEHQSDTKKLAVLKSVYHYVESLVS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtggcacacaccaacgaaccgacttttttcttctttgattacgaaacctttggcattagc
cctgctctcgatcgaccttgtcagtttgcaggcgtacgaacagataaagacttcaatatc
attggtgaaccgttggtgatttattgtcagccacccaatgactatttgcctcagccagag
gcgtgcttgatcaccggcattacgcctcaagtcgctgtcagccgaggtcttcctgagcca
gaattcatcgccaaaatccatgagcaactctccctgccgggaacgtgctctgtcggctat
aacaatattcgatttgatgatgaagtctcacgctacacgctttaccgtaacttctttgac
ccttacggatggagttggcaaaacggtaactcacgttgggatttattggatgccatgcgc
gccgcgtttgcacttcgccctgatggcatagagtggccagtcaacgccgagggtttcacc
agctttaagttagagcacctttccgtcgccaatggcattgaacatgccaatgcacacgat
gcaatggccgatgtcattgccaccatcgaaatggcgaagaagttcaagcacgcccagcca
cgcttgtttgactacctttatgcacatcgcaataaaaacaaactaaccgcactgatcgac
atcgttgccatgaaaccgctggtgcatgtttcgggcatgtttggcactgaacgtggcaat
acaagttgggttgttcctgttgcgtggcaccctgataacaaaaacgccgttattgccatt
gatctggcgctcgatccctcgccattgtttgatttagacgctgacgcacttcgtgagcgc
ctctatacaaaacgtgctgatctggcacctgatgagttaccggctcccatcaaactcatc
catattaacaaatgcccggtgctggctgaggcaaaaaccttgcgcccagaagatgccgct
aggcttggcattgatcgtcagtcttgtttggacaacctaaagaaacttcaggcgcaacct
caaataagagaaaaactgatcgagctttacgctgaaaagcgagagtacggggatagtaac
aacatcgatgctgcgctctatgatggcttcttctcaccgtctgatcgctccaccatggat
atcattcgtcaaaccaaacctgaaaatcttgctgctcttgaaatcaacgtcgccgacaag
cgaattcatccgctgctgtttcgttaccgtgcacgaaatttttcttggacactgactgac
accgaacaaaagaaatggcaccttcatcgccgcgactatttcgaaacgcatttgcctgaa
tacatggcaagattagaagatctggtggaggaacatcagagcgacacaaaaaaattagcg
gttttgaaatccgtttatcactatgtcgaatcgcttgtatcttag
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